Gene Information

Name : basR (PANA_2237)
Accession : YP_003520532.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Virulence
Product : BasR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2491882 - 2492568 bp
Length : 687 bp
Strand : +
Note : Transcriptional regulatory protein BasR/PmrA; Similar to Klebsiella pneumoniae subsp. pneumoniae MGH 78578, DNA-binding transcriptional regulator BasR (NCBI: YP_001334473.1); COG: Signal transduction mechanism; Subcellular localization as predicted by Pso

DNA sequence : 
ATGAAAATATTGATTGTTGAAGACGATGCCCTGCTACTTCAGGGGCTGGTACTGGCGCTGGAAGGTGCAGGCTACGTGTG
CGATGGTGTTTCAACGGTCCGTTCTGCCGAAGCCCACCTTGCCAGCGGACTTTACAGCCTGGTGGTGCTGGATATCGGCC
TGCCGGACGAAGACGGCCTGCATTTACTGCAACGCCTGCGTCGTCAAAAGCAGATGCAGCCCGTTTTAATCCTGACCGCA
CGCGATACCATTGAAGAGCGCATAGCCGGACTCGATGCCGGCGCTGATGACTATTTGATTAAGCCTTTTGCGCTGGATGA
GTTGCTGGCACGGATTCGCGCGCTTATCAGGCGTCACGTTAACCAGGGCGATTCCCGCCTCGAAGTGGGTAATCTGTCAC
TGGATATGACCCACCGCCAGATTCATCTGGATGACGTGCTGCTCGACCTGACGCCCAAAGAGTTTTCCATTCTCTCCCGG
TTGATGTTGAAAGCAGGCCATCCGGTTCACCGTGAGTTGCTGTATCAGGACATCTACAACTTTGATAATGAGCCCTCCAC
CAATACGCTGGAAGTCCATATTCATAACCTGCGCGACAAGGTGGGCAAAGCCACGATCCGAACGGTTCGCGGTTTTGGCT
ATGCCTTATCTCAGCCGCGCGCAGAAAACGAGTCATCACCCGAATGA

Protein sequence : 
MKILIVEDDALLLQGLVLALEGAGYVCDGVSTVRSAEAHLASGLYSLVVLDIGLPDEDGLHLLQRLRRQKQMQPVLILTA
RDTIEERIAGLDAGADDYLIKPFALDELLARIRALIRRHVNQGDSRLEVGNLSLDMTHRQIHLDDVLLDLTPKEFSILSR
LMLKAGHPVHRELLYQDIYNFDNEPSTNTLEVHIHNLRDKVGKATIRTVRGFGYALSQPRAENESSPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 6e-24 43
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-24 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 8e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
basR YP_003520532.1 BasR BAC0487 Protein 3e-51 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
basR YP_003520532.1 BasR VFG0473 Protein 5e-58 73
basR YP_003520532.1 BasR VFG0596 Protein 3e-24 42