|
Name : rfbB (PANA_2092) Accession : YP_003520387.1 Strain : Pantoea ananatis LMG 20103 Genome accession: NC_013956 Putative virulence/resistance : Virulence Product : RfbB Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 2339846 - 2340871 bp Length : 1026 bp Strand : - Note : DTDP-Glucose 4 6-Dehydratase; Similar to Pantoea sp. At-9b, NAD-dependent epimerase/dehydratase (NCBI: ZP_05729409.1); COG: Cell wall/membrane/envelope biogenesis; Subcellular localization as predicted by Psort 2.0: Unknown DNA sequence : GTGATTAACGAGGGATTTATGAATTTTCTGGTAACCGGCGCAGCAGGCTTTATTGGCTTTCATGTCAGTCAACGCCTGCT GGCCGCCGGTCACCAGGTTGTCGGTCTTGACAACCTGAATGACTACTATGATGTAAACCTTAAACAAGCTCGCCTTGATA TCATCGGTGACAATCCATCCTTTACCTTTATTAAAGCCAATTTGGCCGATCGTCAGGCTATTGCCACACTTTTTGAACAG CACAATTTTCAGCGCGTTATTCATCTGGCCGCTCAGGCAGGGGTGCGTTACTCACTCGAAAACCCCCATGCGTATGCCGA TGCAAACGTCATTGGGCACCTGAATATTCTTGAAGGCTGCCGCCACCATAAAATCGAGCATTTGCTTTATGCTTCATCCA GTTCGGTTTATGGCCTGAATAACAAGATGCCATTTTCAACAGAAGACAGCGTCGATCATCCCGTGTCATTGTATGCCGCG ACGAAAAAAGCCAATGAGCTGATGTCGCATACCTATTCACATCTCTATCAATTGCCTACCACTGGCTTACGTTTTTTCAC GGTCTATGGCCCGTGGGGACGTCCGGACATGGCGTTGTTTAAATTCACCCGCGCAATGCTTGCAGGCGAGGCGATAGATG TTTATAACCAGGGGCAAATGAAGCGCGACTTTACTTATATCGATGATGTTGCAGAGGCGGTTATTCGCTTGCAGGATGTT ATCCCGCAGGCGGACGCAGACTGGACCGTGGAAACGGGTTCTGCCGCGTCAAGCTCTGCCCCTTATCGCATATATAACCT TGGCAATAGCCAGCCGGTGAGTCTGATTCACTATATTGAAGCGATTGAGAAAGCGCTGGGTGTGAAGGCAAATAAAAATC TGATGCCCATGCAACCGGGGGACGTACTGGCAACCAGCGCGGACACAACCGCATTATTTAATACCATTGGATTTAAACCC CAAACCGGTATTGATGAAGGCGTAAGGCGCTTTGTAGACTGGTATCGAAATTTCTATTCAATCTGA Protein sequence : MINEGFMNFLVTGAAGFIGFHVSQRLLAAGHQVVGLDNLNDYYDVNLKQARLDIIGDNPSFTFIKANLADRQAIATLFEQ HNFQRVIHLAAQAGVRYSLENPHAYADANVIGHLNILEGCRHHKIEHLLYASSSSVYGLNNKMPFSTEDSVDHPVSLYAA TKKANELMSHTYSHLYQLPTTGLRFFTVYGPWGRPDMALFKFTRAMLAGEAIDVYNQGQMKRDFTYIDDVAEAVIRLQDV IPQADADWTVETGSAASSSAPYRIYNLGNSQPVSLIHYIEAIEKALGVKANKNLMPMQPGDVLATSADTTALFNTIGFKP QTGIDEGVRRFVDWYRNFYSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 5e-99 | 57 |
