Gene Information

Name : araD (PANA_2045)
Accession : YP_003520340.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Unknown
Product : AraD
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0235
EC number : -
Position : 2289161 - 2289925 bp
Length : 765 bp
Strand : -
Note : L-ribulose-5-phosphate 4-epimerase; Similar to Pantoea sp. At-9b, L-ribulose-5-phosphate 4-epimerase (NCBI: ZP_05729295.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown

DNA sequence :
TTGCTCCATAACGTTTTTTCTGCCTGCTCCGCACACTATGAAAACCCTTCTCAGCAGGAGAAAAAAATGCTGGAGCACCT
TAAACAACAGGTCCTGGAAGCCAACCTGGATCTCCCCAAATACAACCTTGTCACCTTCACGTGGGGAAACGTCAGCGCGA
TTGACCGTGAGCAAGGTCTGTTAGTGATTAAACCTTCCGGCGTCAGTTACGATGTCATGAAAGTGGAGGACATGGTGGTG
GTCAACCTGGCGACCGGCGATGTGGTGGAGGGCGAAAAACGGCCTTCATCCGATACGGCTACACACCGGGCACTCTACCT
GGCCTGGCCTGAGGTTGGCGGAATCGTCCATACGCATTCACGTCATGCCACCATCTGGGCGCAGGCCGGACGTGCCATCC
CCGCGTGGGGCACCACCCACGCGGACGACTTTTACGGTGAGATTCCCTGCACCCGAGCCATGCGCGATGAAGAAATCAAA
AATCAGTATGAGTGGAATACGGGGGAGGTGATCATTGAAACCTTCGCCGAGCGCGAACTTTCTCCTTCGGCCATTCCTGC
CGTGCTGGTGAATTCTCACGGGCCTTTCGCCTGGGGCAAAGACGCACATGCGGCCGTCCACAGTGCAGTGGTACTGGAAG
AAGTGGCTTACATGGGATTGTTTAGCCAGCAGCTCACGGCCGGGCTGCCTCCCATTCAGCAGACCCTGCTTGATTTGCAC
TATTTGCGCAAACACGGTGAAAATGCCTGGTACGGCCAGAAATAA

Protein sequence :
MLHNVFSACSAHYENPSQQEKKMLEHLKQQVLEANLDLPKYNLVTFTWGNVSAIDREQGLLVIKPSGVSYDVMKVEDMVV
VNLATGDVVEGEKRPSSDTATHRALYLAWPEVGGIVHTHSRHATIWAQAGRAIPAWGTTHADDFYGEIPCTRAMRDEEIK
NQYEWNTGEVIIETFAERELSPSAIPAVLVNSHGPFAWGKDAHAAVHSAVVLEEVAYMGLFSQQLTAGLPPIQQTLLDLH
YLRKHGENAWYGQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 3e-59 55