Gene Information

Name : PANA_1934 (PANA_1934)
Accession : YP_003520229.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Unknown
Product : hypothetical Protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0726
EC number : -
Position : 2160415 - 2161290 bp
Length : 876 bp
Strand : -
Note : Polysaccharide Deacetylase; Similar to Pantoea sp. At-9b, polysaccharide deacetylase (NCBI: ZP_05729924.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown

DNA sequence :
ATGGCTAAAGAAATTTTGTGTGCATTTGGTGTTGATGTGGATGCGGTTGCGGGCTGGCTGGGTTCTTACGGCGGGGAAGA
CTCGCCGGATGATATCTCACGCGGACTGTTTGCCGGGGAGGTGGGTGCACCGCGCCTGCTGAAAATGTTTGCGGAACACC
AGTTGCGTACAACCTGGTTTATCCCCGGTCACTCCATTGAAACCTTTCCTGAGCAGATGAAAGCGGTGGTGGACGCAGGG
CATGAAATTGGCGTTCACGGTTATAGCCATGAAAACCCCATCGCCATGACACCCGCGCAGGAAGAAGCCGTACTGGACCG
CAGCATTGAGCTGGTCACCCAGCTGTCCGGAAAACGTCCGACAGGCTATGTGGCGCCCTGGTGGGAATTCAGCAACGTGA
CCAACGAGCTGCTGCTGAAAAAGGGCATCAAATACGATCACAGTCTGATGCACAACGACTTTCATCCTTACTACGTTCGC
GTCGGCGACAGCTGGACCAAAATTGATTACAGCCAGCATCCCGACAGCTGGATGAAGCCGCTGACGCGTGGTGAAGAGAC
CGATTTGGTCGAGATTCCCGCTAACTGGTATCTCGATGACCTGCCGCCAATGATGTTTATCAAAAAATCGCCAAACAGCC
ACGGCTTTGTGAACCCCCGTCATTTGGAAGAGATCTGGCGCGACCAGTTCGACTGGGTTTACCGCGAAAATGACTACGCC
GTGTTTACCATGACCATCCATCCCGACGTTTCAGGTCGTCCGCAGGTGCTGCTGATGCTGGAACGTCTGATCAAGTACAT
CCAGAGCCACCAGGGTGTGCGATTTGTCACCTTCGACGAAATCGCAGATGACTTCTTAGCGCGCAAACCGCGTTAA

Protein sequence :
MAKEILCAFGVDVDAVAGWLGSYGGEDSPDDISRGLFAGEVGAPRLLKMFAEHQLRTTWFIPGHSIETFPEQMKAVVDAG
HEIGVHGYSHENPIAMTPAQEEAVLDRSIELVTQLSGKRPTGYVAPWWEFSNVTNELLLKKGIKYDHSLMHNDFHPYYVR
VGDSWTKIDYSQHPDSWMKPLTRGEETDLVEIPANWYLDDLPPMMFIKKSPNSHGFVNPRHLEEIWRDQFDWVYRENDYA
VFTMTIHPDVSGRPQVLLMLERLIKYIQSHQGVRFVTFDEIADDFLARKPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46604.1 hypothetical protein Not tested HPI Protein 2e-127 88