Gene Information

Name : arsB (PANA_1895)
Accession : YP_003520190.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Resistance
Product : ArsB
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 2114485 - 2115840 bp
Length : 1356 bp
Strand : -
Note : Arsenical pump membrane protein; Similar to Strongylocentrotus purpuratus, PREDICTED: hypothetical protein (NCBI: XP_001204083.1); COG: Inorganic ion transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane

DNA sequence :
ATGATTTTTCATATCTGTTTGCAGGGCTGTCTTACGTCCTGTTTACCAGACTTTGTATTAAAAGGAAAAAGTATGTTTCT
GGCAGGCGCTATATTCGTCCTGACACTGGTACTGGTTATCTGGCAGCCAAAAGGGCTGAGTATTGGCTGGAGTGCTGTTA
TCGGGGCTGCGCTGGCCCTGCTGACGGGCGTAGTGCATTTCGGCGATATTACGGCCGTCTGGCAGATCGTTTGGAACGCG
ACGGCCACGTTTATCGCGGTGATTATCATCAGCCTGCTGCTCGATGAATCTGGTTTTTTTGAGTGGGCTGCCCTGCACGT
TTCCCGATGGGGTGGCGGTAAAGGCAGGCTGCTGTTCACGTATAGTGTTCTGCTGGGTGCGGCAGTGGCGGCCTTGTTTG
CGAATGACGGGGCGGCACTGATCCTGACGCCTGTTGTCATTGCCATGCTGTTGGCGCTGGGCTTCAGCCCCGGCGCAACG
CTGGCGTTTGTGATGGCGGCAGGTTTTATCGCTGACACATCCAGCCTGCCACTCATCGTATCGAACCTGGTTAACATCGT
GACGGCGGACTTTTTTAAGCTGGGATTCAGCGAATACGCGTCTGTCATGATGCCGGTCAACATGGCATCCGTGGCGGCCA
CGCTGGTTATGCTTCATTTCTTCTTCCGTAAAGACATCCCGATCGCGTATGACATGGCAAAACTAAAGGTACCACGGGAA
GCCATTCGTGACGTGCGAACCTTTAAAGCCGGATGGCTGGTTCTTTGTCTGTTGCTGACCGGTTTTTTTGCTCTGGAGCC
GCTCGGCGTTCCGGTCAGTCTGGTTGCTGCGGTCGCGGCATTTATTCTGTGGCTGGTTGCCCGTAAAGGACAGGTGATTG
ATACTCGTAAAGTCCTGAAAGGCGCGCCCTGGCAGATCGTCACCTTCTCGCTGGGTATGTATCTGGTGGTTTATGGCCTG
CGCAACGCCGGACTGACGGATTACCTCTCGTCCGCCCTGAACGGGTTTGCAGAGCATGGTGTATGGGGCGCCACGCTCGG
CACCGGTTTTCTGACGGCCTTTCTGTCATCGGTGATGAACAACATGCCTACAGTCCTGATTGGCGCACTGTCCATTGATG
GCAGCACGGCTGAGGGTGTGGTGAAAGAGGCGATGATTTACGCCAATATCATCGGTTGCGATCTTGGCCCGAAAATCACC
CCCATCGGCAGCCTGGCGACCCTGCTGTGGCTACACGTTCTGGCGCAGAAAAATATCACCATCAGCTGGAGCAACTACTT
CCGCGTGGGCGTTGTGATGACCCTGCCGGTACTTTTTGTCGCGCTGGCGGCGCTGGCCCTGCGTCTTTCTGTCTAA

Protein sequence :
MIFHICLQGCLTSCLPDFVLKGKSMFLAGAIFVLTLVLVIWQPKGLSIGWSAVIGAALALLTGVVHFGDITAVWQIVWNA
TATFIAVIIISLLLDESGFFEWAALHVSRWGGGKGRLLFTYSVLLGAAVAALFANDGAALILTPVVIAMLLALGFSPGAT
LAFVMAAGFIADTSSLPLIVSNLVNIVTADFFKLGFSEYASVMMPVNMASVAATLVMLHFFFRKDIPIAYDMAKLKVPRE
AIRDVRTFKAGWLVLCLLLTGFFALEPLGVPVSLVAAVAAFILWLVARKGQVIDTRKVLKGAPWQIVTFSLGMYLVVYGL
RNAGLTDYLSSALNGFAEHGVWGATLGTGFLTAFLSSVMNNMPTVLIGALSIDGSTAEGVVKEAMIYANIIGCDLGPKIT
PIGSLATLLWLHVLAQKNITISWSNYFRVGVVMTLPVLFVALAALALRLSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 2e-147 80
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 2e-102 58
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 8e-100 57
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 1e-105 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB YP_003520190.1 ArsB BAC0578 Protein 2e-149 81
arsB YP_003520190.1 ArsB BAC0576 Protein 3e-148 81
arsB YP_003520190.1 ArsB BAC0031 Protein 1e-142 80
arsB YP_003520190.1 ArsB BAC0577 Protein 5e-144 79
arsB YP_003520190.1 ArsB BAC0575 Protein 6e-105 57
arsB YP_003520190.1 ArsB BAC0574 Protein 9e-102 57