Gene Information

Name : hemC (PANA_0162)
Accession : YP_003518457.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Unknown
Product : HemC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 187234 - 187968 bp
Length : 735 bp
Strand : -
Note : Porphobilinogen deaminase; Similar to Geobacter uraniireducens Rf4, porphobilinogen deaminase (NCBI: YP_001229148.1); COG: Coenzyme transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown

DNA sequence :
ATGTTAGAAAACCGTGCCGATCTGGCCGTACATTCGATGAAAGATGTGCCCGTGGCATTTCCGGAAGGCCTGGGCCTGGT
CACCATTTGCCAGCGGGACGATCCGCGCGATGCGTTTGTCTCCAATCACTACGCGTCAATTGATGAACTTCCACAGGGCG
CTGTCATTGGAACGTCAAGCCTGCGGCGTCAGTGCCAGATTAGCGCGCGACGTCCCGATCTGGTGATTCGCTCGCTGCGC
GGGAACGTGGGCACACGATTAAGTAAGCTTGATGCTGGCGAATATGACGCCATTATTCTTGCCGCCGCCGGGTTGAATCG
ACTTGGCCTGGCCGATCGTATTCGCCAACCGCTGCCTGCAGATATTTCCTTACCCGCCGTGGGTCAGGGCGCAGTTGGCA
TCGAATGTCGGTTAGACGACAGCACGTTAATTGCGCTGTTACAGGCATTGAATCACGATGATACGGCGGTCTGTGTGAAA
GCGGAACGCGCCATGAATACCCGACTTGAAGGCGGCTGCCAGGTTCCGATTGGCAGCTTTGCCGTACTTGAAGGCGACGA
ACTCTGGCTTCGCGGTCTGGTGGGTGCACCCGATGGGAGCGTCATGGTGAGCGGTGAACGCCGTGGGCCTCGCGATCAGG
CAGAGCAAATGGGCATTTCGCTGGCAGACGAGCTGCTCAACGGTGGCGCACGTGAAATTCTGCGCGACGTTTATCAGGGG
CAACCTCCCGTATGA

Protein sequence :
MLENRADLAVHSMKDVPVAFPEGLGLVTICQRDDPRDAFVSNHYASIDELPQGAVIGTSSLRRQCQISARRPDLVIRSLR
GNVGTRLSKLDAGEYDAIILAAAGLNRLGLADRIRQPLPADISLPAVGQGAVGIECRLDDSTLIALLQALNHDDTAVCVK
AERAMNTRLEGGCQVPIGSFAVLEGDELWLRGLVGAPDGSVMVSGERRGPRDQAEQMGISLADELLNGGAREILRDVYQG
QPPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-57 58
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-57 58