Gene Information

Name : aldA (PANA_1562)
Accession : YP_003519857.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Virulence
Product : AldA
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1752335 - 1753855 bp
Length : 1521 bp
Strand : +
Note : Aldehyde dehydrogenase; Similar to Pantoea sp. At-9b, Aldehyde Dehydrogenase (NCBI: ZP_05728467.1); COG: Energy production and conversion; Subcellular localization as predicted by Psort 2.0: Cytoplasmic

DNA sequence :
ATGCGCTATGCCGCTCCAGGAGAATCCGGTTCTCTCATCACGCTGCAAAAGCACTATGGCAATTTCATCAATGGGGCGTT
CGTTGCGCCGGTCAATGGCCACTACTTCACCAATACCTCGCCCGTTAATGGTTCAGATGCCGGGGCGTTTCCCCGCTCAG
ACAAGGCAGACGTCGATAACGCGGTCGCTGCCGCTGCCGCCGCGGCGGATGCCTGGGGAAAAACCTCGCCTCAGCAGCGC
GCCCTGGTGCTGCTTAAAATCGCCGACCGGCTGGAAGAGAAGCTGGAATACCTGGCGGTAAATGAAACCTGGGACAACGG
TAAACCGGTTCGTGAAACGCTGGCCGCCGATATGCCGCTGGCGGTGGATCACTTCCGCTATTTTGCCGGTTGTGTCAGGG
CGCAGGAGGGCAGCGCGGCGGAGATCGACGAATTTACTGCCGCCTATCACTTTCATGAACCCCTGGGCGTGGTGGCGCAG
ATCATCCCGTGGAACTTTCCGCTGCTGATGGCGGCATGGAAGCTGGCGCCGGCCCTGGGGGCAGGGAACTGCGTGGTGCT
CAAGCCCGCGGAGCAAACGCCGCTGTCGATTACCCTGTTTGTTGACCTGATTAAAGATCTGCTGCCGCCCGGCGTGGTCA
ACGTGGTCCACGGTTATGGTAAAGAAGCGGGTGAGGCGCTGGCCTCCCATCCGGGCATTGCCAAAGTGGCATTTACGGGA
TCGACGGCGACGGGCGGCCATATCCTGGAACTGGCGGCGAAAAGCTTGATTCCGTCTACGGTCGAACTGGGCGGGAAATC
GCCGAACATCTTTTTCGAAGATATCATGCAGGCCGAAGAAAGCTTTATTGAAAAAGCGGCGGAAGGGGTTGTGCTTGGCT
TCCTGAATCAGGGTGAAGTCTGTACCTGTCCGTCGCGGGCGCTGGTGCAGGAGTCCATTTACGAGCCCTTTATGGCGGCA
GTGCTTAAACGCATTAAAACCATCAAGCGCGGCGATCCCATGGATACGGAAACGATGGTGGGCGCGCAGGCTTCTCAGCA
GCAGTTCGATAAAATTCTTTCCTATCTGGAGATCGCCCGTCAGGAAGGGGCCGAGGTGCTGATCGGCGGCGGTGTTGAGA
CGCTCGATGACACGCTGGCCAGCGGCTACTACATTCAGCCGACGCTGCTGAAAGGCAACAACAGCATGCGGGTATTCCAG
GAAGAGATCTTTGGCCCGGTGGTGGGCATCACCACCTTCAAGGATGAGGCAGAGGCCATCGCCATTGCCAACGACTCCAT
CTACGGCCTGGGCGCGGGCGTCTGGACACGGGATATCAACCGGGCCTACCGCGTCGGGCGGGCAATCAAAGCCGGACGTG
TCTGGACGAACTGCTATCACCTTTATCCCGCTCACGCGGCCTTCGGTGGCTATAAAAAATCAGGTATCGGTCGCGAGACG
CACAAGATGATGCTTGATCACTATCAGCAGACGAAAAACCTGTTAGTGAGCTACAGCATCCAGCCGCTTGGCTTCTTCTG
A

Protein sequence :
MRYAAPGESGSLITLQKHYGNFINGAFVAPVNGHYFTNTSPVNGSDAGAFPRSDKADVDNAVAAAAAAADAWGKTSPQQR
ALVLLKIADRLEEKLEYLAVNETWDNGKPVRETLAADMPLAVDHFRYFAGCVRAQEGSAAEIDEFTAAYHFHEPLGVVAQ
IIPWNFPLLMAAWKLAPALGAGNCVVLKPAEQTPLSITLFVDLIKDLLPPGVVNVVHGYGKEAGEALASHPGIAKVAFTG
STATGGHILELAAKSLIPSTVELGGKSPNIFFEDIMQAEESFIEKAAEGVVLGFLNQGEVCTCPSRALVQESIYEPFMAA
VLKRIKTIKRGDPMDTETMVGAQASQQQFDKILSYLEIARQEGAEVLIGGGVETLDDTLASGYYIQPTLLKGNNSMRVFQ
EEIFGPVVGITTFKDEAEAIAIANDSIYGLGAGVWTRDINRAYRVGRAIKAGRVWTNCYHLYPAHAAFGGYKKSGIGRET
HKMMLDHYQQTKNLLVSYSIQPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-150 63
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-154 61
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-154 61
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-154 61
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-153 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldA YP_003519857.1 AldA VFG0082 Protein 2e-150 63