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Name : ldcA (PANA_1545) Accession : YP_003519840.1 Strain : Pantoea ananatis LMG 20103 Genome accession: NC_013956 Putative virulence/resistance : Unknown Product : LdcA Function : - COG functional category : V : Defense mechanisms COG ID : COG1619 EC number : - Position : 1735312 - 1736235 bp Length : 924 bp Strand : - Note : Muramoyltetrapeptide carboxypeptidase; Similar to Pantoea sp. At-9b, Muramoyltetrapeptide carboxypeptidase (NCBI: ZP_05728442.1); COG: Defense mechanisms; Subcellular localization as predicted by Psort 2.0: Cytoplasmic DNA sequence : ATGACGTCACGTTCCATCCGTCTTATTGCCCCTTCAGGTTATTGCCATAATCAACCTGCGGCCCTGCTCGGGGTTGAACG CCTGCGAGCGGAAGGACATCGCGTGGACAATGACGCCGTCATCGCGCGGCGCTTCCAGCGCTTTGCTGGCACCGACGAGG CGCGCTCAGGCGATATTAATGAACTGGCTGACTTAGCAACCCTACCCGATATTGTGCTGGCGGTGCGCGGCGGTTATGGC GCAACACGGCTGCTGCCGTCGCTGGATTATGCCGGCCTGAAGCGTCGTTTAGCGCACCAGCCGCTGGCCATCTGTGGGCA CAGCGACTTCACCGTGTTGCAGTTAGCGCTGCTCCAACATGCCGGTTTGATTAGCTTCAGTGGACCGATGCTGGCGGGCA ATTTTGGCGCTGAGGTTTTATCCGAATTTACCCTGCAGCACTTTTGGCATGCGCTGACATCACCTACAGTCAAGGTGGCC TGGCAGAGTGAAACACCCGATAACGGCCACTGGCAGGGGACGCTGTGGGGCGGCAACCTGGCGATGCTCTGCTCGCTAAT CGGGACGCCATGGCTGCCGCAGATTGAGAACGGCATTCTGGTTATCGAAGATGTTAATGAGCATCCGTTCCGTATTGAAC GTATGCTGCTGCAGTTGCACCAATGCGGTGTGCTGGCCAGACAGCAGGCAATTGTCACCGGCAGTTTCACCAGTACCGCT CTGTCGGAGTACGACAACGGATTTGATTTCCCTACGGTCTGGCAGCACATTCGCGAGGTCAGCGGCCTGCCGGTTATCAG CGACCTGGACTTCGGTCACGCTCCGGATACCGTCACCTTACCTCTGGGTGCAACGGCCACGCTGCAGGTGAATCAGGGTC AGGTTGTATTACAGGCGAGCGGACATCCCGTATTGCGCACATAG Protein sequence : MTSRSIRLIAPSGYCHNQPAALLGVERLRAEGHRVDNDAVIARRFQRFAGTDEARSGDINELADLATLPDIVLAVRGGYG ATRLLPSLDYAGLKRRLAHQPLAICGHSDFTVLQLALLQHAGLISFSGPMLAGNFGAEVLSEFTLQHFWHALTSPTVKVA WQSETPDNGHWQGTLWGGNLAMLCSLIGTPWLPQIENGILVIEDVNEHPFRIERMLLQLHQCGVLARQQAIVTGSFTSTA LSEYDNGFDFPTVWQHIREVSGLPVISDLDFGHAPDTVTLPLGATATLQVNQGQVVLQASGHPVLRT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| f304 | AAC61707.1 | F304 | Not tested | PAI I CFT073 | Protein | 3e-81 | 57 |
