Gene Information

Name : fimA (PANA_1524)
Accession : YP_003519819.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Unknown
Product : FimA
Function : -
COG functional category : N : Cell motility
COG ID : COG3539
EC number : -
Position : 1714779 - 1715342 bp
Length : 564 bp
Strand : -
Note : Fimbrial Protein; Similar to Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7, hypothetical protein SPAB_03261 (NCBI: YP_001589455.1); COG: Cell motility and chemotaxis; Subcellular localization as predicted by Psort 2.0: Extracellular

DNA sequence :
TTGATCATAAAGGAAGATAAAATGACTTATCACACCAATAAATTTAGTTTGTCTCTGATTGTGAGTGCCTTTCTGCTGTC
AGGATATGCACAAGCAGATTCTGCTAATACCATTAATTTTCAGGGCGAAGTCTCTGATGAAACCTGTTCAGTTGCCATTA
ACGGCAATGAGAGTTCACCCGTTGTACTGCTTCCTACCGTAAGTAAAGCGGATTTAGATACCAGTGGTAAGACGGCAGGT
AAAACTGACTTTACCGTCGGTCTGACAGGCTGCAGCGGTTCAGCGACCACCACCCAAATCTCAACGGTATTCGTGGGCAA
TAACGTGAGCGCAGCAGGTAACCTGACGAACACCGGGTCGGCTGAAAATGTTGAGATTCAGATGCTGGATACGGCGGGTA
CGGTAATCAACCTGACGGGGGGCTTTACCGGTAGCGGCGACTTAAGTTTATCCGCGAATGAGACTGAAAAGTCAGCGACC
TATGGCGCGCAATACTTTTCAACCGGGGTGGCAACATCCGGTACGGTCGCTGCCTCCATTCAGTATGCCATAACTTACCG
TTAG

Protein sequence :
MIIKEDKMTYHTNKFSLSLIVSAFLLSGYAQADSANTINFQGEVSDETCSVAINGNESSPVVLLPTVSKADLDTSGKTAG
KTDFTVGLTGCSGSATTTQISTVFVGNNVSAAGNLTNTGSAENVEIQMLDTAGTVINLTGGFTGSGDLSLSANETEKSAT
YGAQYFSTGVATSGTVAASIQYAITYR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cupD1 AAP84171.1 putative fimbrial protein precursor Not tested PAPI-1 Protein 6e-22 43