Gene Information

Name : kdsB (PANA_1361)
Accession : YP_003519656.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Virulence
Product : KdsB
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : -
Position : 1539922 - 1540671 bp
Length : 750 bp
Strand : +
Note : 3-deoxy-manno-octulosonate cytidylyltransferase; Similar to Pantoea sp. At-9b, 3-deoxy-D-manno-octulosonate cytidylyltransferase (NCBI: ZP_05728893.1); COG: Cell wall/membrane/envelope biogenesis; Subcellular localization as predicted by Psort 2.0: Cytopl

DNA sequence : 
ATGAGTTTTATCGCCATCATTCCTGCTCGTTATGCCTCAACCCGTCTACCCGGTAAACCCTTGGTCGATATTCATGGCAA
GCCGATGGTGGTACATGTGATGGAGCGCGCGCGCGAATCCGGTGCCAGCCGGGTTATCGTGGCGACCGATCACCCGGATG
TGGCCAGCGCAGTGGAAGCGTCGGGAGGCGAAGTTTGCATGACGCGCGCCGATCATCATTCAGGCACAGAACGCCTTGCC
GAAGTGATTGAGAAGTATCAGTTCGCAGACGATCAAATTATCGTCAATGTTCAGGGCGATGAGCCTATGATCCCGGCCGA
AATCGTGCACCAGGTGGCGAATAATCTGGCGCAGTCTGAGGCCGGTATGGCGACGCTGGCCGTGCCCATTACCGATGCAG
AAGAAGCCTTTAATCCTAACGCCGTGAAAGTCGTTATGGATGCCAAAGGCTATGCGCTGTATTTTTCTCGTGCGACCATT
CCCTGGGACCGCGAGCGCTATGCGGAATCACGCGATCGCATCGGCGATACGCTGCTCCGGCACATTGGCATTTACGCCTA
CCGGGCAGGCTTTATTCGCCGTTACATCGACTGGGCACCTTGTCCCCTTGAGCAGATTGAATTACTCGAGCAGCTCCGGG
TGCTGTGGTACGGCGAAAAGATTCACGTGGCGGTAGCAAAAACGGTGCCGGGCGTTGGGGTCGATACGCCAGAGGACCTT
ATTCGTGTGCGTGCTGCCATGCGCGGCTGA

Protein sequence : 
MSFIAIIPARYASTRLPGKPLVDIHGKPMVVHVMERARESGASRVIVATDHPDVASAVEASGGEVCMTRADHHSGTERLA
EVIEKYQFADDQIIVNVQGDEPMIPAEIVHQVANNLAQSEAGMATLAVPITDAEEAFNPNAVKVVMDAKGYALYFSRATI
PWDRERYAESRDRIGDTLLRHIGIYAYRAGFIRRYIDWAPCPLEQIELLEQLRVLWYGEKIHVAVAKTVPGVGVDTPEDL
IRVRAAMRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 3e-36 46
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 2e-36 46
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 1e-37 46