Gene Information

Name : ybiF (PANA_1283)
Accession : YP_003519578.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG5006
EC number : -
Position : 1451214 - 1452185 bp
Length : 972 bp
Strand : -
Note : Inner membrane transport protein YbiF; Similar to Pantoea sp. At-9b, protein of unknown function DUF6 transmembrane (NCBI: ZP_05728810.1); COG: Amino acid transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane

DNA sequence :
TTGACCGCCACTTCCATTACACTGGTCATCTTTAGCTCATGTTTGGGAAGTGCCTACAGGATGTCAGCCACCTCATTAAA
GTCCATTACACCCGTTTTTATTCCCGTTATTGTTCTGCTTGTCTCAATGTTGTCACTTCAGGGCGGTGCCTCGCTGGCGA
AAACCCTGTTTCCCACCGTGGGCGCAACCGGCATTACTGCGCTGCGTCTGGGATTTGGCACCCTGATCCTGTGCATTATT
TTCAAACCCTGGCGACTGCGTTTTAGCCGGGAACAACGTACGCCACTGCTGATTTATGGTTTGTCACTGGGCGCGATGAA
CTTCTTGTTCTACCTCTCCATCCGTACCGTGCCCTTAGGCATTGCGGTGGGCCTGGAGTTTGTCGGTCCACTGACGCTGG
CGCTGCTCGGTTCGCGCCGCGCGCTGGACTTTGTCTGGGTCCTGCTTGCCGTGGCAGGGCTGTGGTTCCTGCTGCCGTTT
AGCACCGGCATTGCCTCGGTGGATCCGGTCGGCGCGCTGTTCGCGCTGGGTGCCGGCGCCTGTTGGGCGATATATATCTT
ATCGGGCCAGCGCGCAGGGGCAGAACATGGTGCTGCGACCGTGGCCATCGGATCGCTTATTGCCTCGCTGGTTTTTGTTC
CCGTGGGTCTGACGTTTGCCGCCAGTGGCATCTGGCAGTGGAGCGTGGTTCCCGTCGCGATTCTGGTGGCGTTTCTTTCT
ACAGCACTGCCCTACTCGCTGGAAATGGTGGCATTAACGCGCTTGCCGGCGCGCATCTTTGGCACATTGATGAGCCTTGA
GCCTGCAGTGGCAGCTCTGTCGGGGATGATGTATCTGCATGAAAGCCTTTCGGGTAAGCAATGTCTGGCGTTGCTGGCCA
TCATTCTGGCTTCCGCAGGCGCCACCCTGACGATGCGTCCAAGAAAGAGTCAGTTAAATGAAGTTGAATTGACCGACAAC
GCAAAAAAATAA

Protein sequence :
MTATSITLVIFSSCLGSAYRMSATSLKSITPVFIPVIVLLVSMLSLQGGASLAKTLFPTVGATGITALRLGFGTLILCII
FKPWRLRFSREQRTPLLIYGLSLGAMNFLFYLSIRTVPLGIAVGLEFVGPLTLALLGSRRALDFVWVLLAVAGLWFLLPF
STGIASVDPVGALFALGAGACWAIYILSGQRAGAEHGAATVAIGSLIASLVFVPVGLTFAASGIWQWSVVPVAILVAFLS
TALPYSLEMVALTRLPARIFGTLMSLEPAVAALSGMMYLHESLSGKQCLALLAIILASAGATLTMRPRKSQLNEVELTDN
AKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0589 NP_938965.1 hypothetical protein Not tested Not named Protein 7e-29 41