Gene Information

Name : yfdH (PANA_1067)
Accession : YP_003519362.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 1217721 - 1218632 bp
Length : 912 bp
Strand : -
Note : Bactoprenol glucosyl transferase homolog from prophage CPS-53; Similar to Citrobacter koseri ATCC BAA-895, hypothetical protein CKO_01844 (NCBI: YP_001453407.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: In

DNA sequence :
ATGAAAATATCGCTGATTGTTCCTGTTCTTAATGAAGAAGACGCTATTCCCGTGTTTTATAAAACGGTGCGTGAATTTGA
GGCGTTGAAACAGCACACCATTGAAATCGTTTTTATAAATGACGGCAGTAAAGATGCAACAGAATCTATTATCAATGCGC
TTTCGGTTTCAGATCCTCTGGTCGTGCCGCTGTCCCTTACCCGCAACTTTGGTAAAGAACCTGCTCTTTTCGCGGGATTA
GAGCATGCTACGGGTGATGCTGTTATCCCTATTGATGTTGATTTACAAGATCCCATCAACGTCATTCCTTTATTGATTGA
AAAATGGCAGGCAGGTGCGGATATTGTTCTGGCTAAGCGCATCGACAGGTCTACTGATGGGCACCTGAAAAGGAAGACGG
CGGAATGGTTTTACACCTTACATAATAAAATCAGTAACCCGAAAATTGAAGAAAATGTAGGTGACTTTCGCCTGATGTCA
CGGGACGTGGTTGAGAATATTAAGAAGATGCCAGAGCGGAACCTCTTCATGAAAGGGATTCTTTCATGGGTTGGCGGCAA
GACGGAGGTAATTGAGTATGCCAGAGCCGAGCGTATCGCTGGCGATTCAAAGTTTAATAGCTGGAAGCTGTGGAACCTGG
CTCTTGAAGGCATAACCAGTTTCTCAACCTTTCCGCTACGTATGTGGACGTATATTGGCCTGCTCGTGGCGAGCTTCGCG
TTTTTGTATGGCGCATGGATGATCGTGGATAAAATCTGGTTTGGCAACAGTGTTCCCGGTTACCCTTCGCTTTTAGTATC
AATACTCTTTCTTGGTGGCGTTCAGCTCATTGGTATCGGTGTATTGGGCGAGTATATCGGAAGAATATACATAGAGAGTA
AGAACCGACCACGTTACATCATTAAAAAGTGA

Protein sequence :
MKISLIVPVLNEEDAIPVFYKTVREFEALKQHTIEIVFINDGSKDATESIINALSVSDPLVVPLSLTRNFGKEPALFAGL
EHATGDAVIPIDVDLQDPINVIPLLIEKWQAGADIVLAKRIDRSTDGHLKRKTAEWFYTLHNKISNPKIEENVGDFRLMS
RDVVENIKKMPERNLFMKGILSWVGGKTEVIEYARAERIAGDSKFNSWKLWNLALEGITSFSTFPLRMWTYIGLLVASFA
FLYGAWMIVDKIWFGNSVPGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYIESKNRPRYIIKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 5e-115 86
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 1e-113 85

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfdH YP_003519362.1 hypothetical protein VFG0670 Protein 3e-114 87