Gene Information

Name : aldA (PANA_0984)
Accession : YP_003519279.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Virulence
Product : AldA
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1134134 - 1135654 bp
Length : 1521 bp
Strand : +
Note : Aldehyde dehydrogenase; Similar to Pantoea sp. At-9b, Aldehyde Dehydrogenase (NCBI: ZP_05727471.1); COG: Energy production and conversion; Subcellular localization as predicted by Psort 2.0: Cytoplasmic

DNA sequence :
ATGCGTTATGCCCATCCCGGCACACCTGGTGCGTTAGTGACGTTTAAATCTGCCTACGGCAACTACATTGATGGCAAATT
TATCGAGCCGCTGAGTGGTGAGTACTTCATGAATACGTCACCCGTCAACGGCAGTGACATTGCCCGGTTTCCTCGTTCCG
ATGCGCGCGATATTGATTTAGCGCTGGATGCCGCGCACCGGGCTGCAGAAGCCTGGGGAAAAACCTCCGTACAAACCCGA
TCTAATCTGCTGCTCCAGGTGGCTGACCGCATTGATGCCAATCTCGAAACCCTGGCCGTGGCGGAAAGCTGGGACAACGG
CAAACCGATTCGGGAAACGCTCAATGCCGATCTGCCGCTGGCGGCCGACCATTTTCGTTACTTCGCAGGATGCCTGCGCG
CGCAGGAGGGCAGCACCGGCGAGATCGATGAAAAAACCGTGGCCTACCATTTTCATGAGCCGCTGGGCGTGGTGGGGCAA
ATTATTCCTTGGAATTTTCCGTTGCTGATGGCCGCATGGAAGCTGGCGCCGGCCCTGGCTGCCGGTAACTGTGTGGTGCT
TAAGCCTGCGGAGCAAACTCCGCTGGGCATTACGCTGCTGATGGAGATGATCGGCGACCTGTTTCCTGCAGGCGTGCTAA
ACGTGGTACAGGGTTTCGGCCGCGAGGCGGGCGAAGCGTTGGCAACCAGTAAACGCATTGCCAAAATCGCCTTCACCGGT
TCTACGCCGGTGGGACGTCATATCATGGCCTGTGCCGCAGAAAATATTATTCCCTGTACTGTGGAGCTGGGCGGGAAATC
TCCAAACATCTACTTCGCCGACATCATGAATGGCGAGCCGGACTTTATTGACAAGGCGGTGGAAGGACTGGTGCTGGGCT
TCTTTAATCAGGGCGAGGTATGTACCTGTCCGTCCCGTGCGCTAATCCATGAGTCCGTTTACGCGCCTTTCATGGAGCGG
GTGATGGCCAAAGTCGCTACCATTCGTCGCGGCGATCCGCTCGATACCGACACGATGATTGGCGCCCAGGCTTCGCGTCA
GCAGTTCGATAAAATTTTGTCGTATATCGAGATTGCCCGCAACGAAGGGGGCGAGATCCTGACCGGGGGTGAGCGGGCCT
TGATATCGTCCGAACTGGATAACGGTTTCTATATTCAGCCCACGCTGATTAAAGGCAGCAACAGCATGCGCTGCTTTCAG
GAGGAAATCTTTGGCCCGGTTATCGGCATCACCACCTTCAAAGATGAGGCTGAAGCCTTGCGTATTGCCAATGAAACCCA
GTTTGGATTGGGAGCGGGCGTCTGGACGCGGGACAGCAATTTAGCCTACCGCATGGGGCGCGCCATTAAAGCCGGGCGCG
TCTGGACCAACTGTTACCACATCTATCCGGCCCATGCTGCCTTTGGGGGTTATAAACAGTCCGGCGTGGGTCGCGAAACA
CACAAAATGGCACTCAACCAGTACCAGCAGACCAAAAACCTGTTAGTCAGCTATGACACGGCACCGCTGGGGCTGTTTTG
A

Protein sequence :
MRYAHPGTPGALVTFKSAYGNYIDGKFIEPLSGEYFMNTSPVNGSDIARFPRSDARDIDLALDAAHRAAEAWGKTSVQTR
SNLLLQVADRIDANLETLAVAESWDNGKPIRETLNADLPLAADHFRYFAGCLRAQEGSTGEIDEKTVAYHFHEPLGVVGQ
IIPWNFPLLMAAWKLAPALAAGNCVVLKPAEQTPLGITLLMEMIGDLFPAGVLNVVQGFGREAGEALATSKRIAKIAFTG
STPVGRHIMACAAENIIPCTVELGGKSPNIYFADIMNGEPDFIDKAVEGLVLGFFNQGEVCTCPSRALIHESVYAPFMER
VMAKVATIRRGDPLDTDTMIGAQASRQQFDKILSYIEIARNEGGEILTGGERALISSELDNGFYIQPTLIKGSNSMRCFQ
EEIFGPVIGITTFKDEAEALRIANETQFGLGAGVWTRDSNLAYRMGRAIKAGRVWTNCYHIYPAHAAFGGYKQSGVGRET
HKMALNQYQQTKNLLVSYDTAPLGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-149 66
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-155 65
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-155 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-155 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-154 65
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-55 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldA YP_003519279.1 AldA VFG0082 Protein 3e-149 66