Gene Information

Name : qseB (PANA_0010)
Accession : YP_003518305.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Virulence
Product : QseB
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 8137 - 8808 bp
Length : 672 bp
Strand : +
Note : Transcriptional regulatory protein QseB; Similar to Pantoea sp. At-9b, two component transcriptional regulator, winged helix family (NCBI: ZP_05729598.1); COG: Signal transduction mechanisms; Subcellular localization as predicted by Psort 2.0: Cytoplasmic

DNA sequence : 
ATGCGAATTTTACTGATTGAAGACGACCGCCTGATTGGAGACGGCATTAAAGCGGGACTCAGTAAGCTGGGATTCAGCGT
TGACTGGTTTGTCTCTGGCGAGGCCGGTTTTCAGGCATTAACGGCGGCGCCGTGGGATGCGGTCGTACTCGATTTATCAC
TGCCTGAGCGTGACGGGCTGGACATATTGCGTCAATGGCGTCAGCAGGGGCACGATGTCCCGGTTCTTATCCTTACCGCC
CGCGATGCGCTTGATCAACGCGTTGAAGGATTACAGATGGGGGCTGACGATTACCTGTGCAAACCCTTTGCCCTTACAGA
AGTTGCCGCACGCTTACAGGCACTGATTCGCCGCCGCCACGGGCAACTCCAGCCCGAACTGCGTCATGGCGATGTAGTGT
TGATTCCCGGTAATCTCTGCGTGGAAAGAAACGGCGAAAATATCGCGTTAAAAAGCCGTGAGCTGGCCCTGCTTGAGCTG
TTTATGCGAAATCCGGATCGGGTACTGACGCGAAGCCAGCTTGAAGAAAAGCTCTATACCTGGGATACCGAAGTGTCGAG
CAATGCGGTAGAAGTGCATATCCATCATCTGCGTAAAAAACTCGGTAACCGCTTTATCCGCACCATCCACGGCGTGGGCT
ATACGCTGGGGGAAAGCGAATGCGATCGATGA

Protein sequence : 
MRILLIEDDRLIGDGIKAGLSKLGFSVDWFVSGEAGFQALTAAPWDAVVLDLSLPERDGLDILRQWRQQGHDVPVLILTA
RDALDQRVEGLQMGADDYLCKPFALTEVAARLQALIRRRHGQLQPELRHGDVVLIPGNLCVERNGENIALKSRELALLEL
FMRNPDRVLTRSQLEEKLYTWDTEVSSNAVEVHIHHLRKKLGNRFIRTIHGVGYTLGESECDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-37 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_003518305.1 QseB BAC0487 Protein 2e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_003518305.1 QseB VFG0473 Protein 1e-38 43
qseB YP_003518305.1 QseB VFG1390 Protein 6e-35 43