Gene Information

Name : HMU08520 (HMU08520)
Accession : YP_003516838.1
Strain : Helicobacter mustelae 12198
Genome accession: NC_013949
Putative virulence/resistance : Unknown
Product : glutamate racemase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0796
EC number : -
Position : 1006211 - 1007140 bp
Length : 930 bp
Strand : +
Note : evidence=ISS; db_xref=cjejuni:Cj1652c; date=20070321; method=automatic:top fasta hit

DNA sequence :
TTGAAATTAGGTATTTTTGACAGCGGGGCGGGTGGACTTAGCGTGCTTGAGCATGTTTTGCGTGCAGAGATCTTTGACTC
CATTATCTATTATGGTGATACAGCGCGCCTCCCCTATGGCACCAAACACCCAGATTCCATTATCTGTTTTTGTCTTGAGG
CACTAGAATTTTTGCTCGTGCAAAATGTAGACATAATTATTGTTGCCTGCAATACTGCAAGCGCCCATGCCCTTGATGCC
ATGCAGAAAGCCGCGCCAAAAATCCCCATCATTGGCGTGATCGAGCCAGGAATCCTAGCAATAAAAAACAGACTCAAAAA
TCTTGATGCAAAAATCCTAGTGCTAGGCACCAAGGCCACAATTCAATCTGCACAATATCAAAGGCATCTAGAAAAGCTTG
GTTATTCCAATATCACTGCGATTCCTACGAGTCTCTTTGTTTCGCTTGTAGAAGAGGGGATCTTTGAAGGTCCTCTAGTA
GAGGAATGTTTGAGGTATTATTTTGGTGGCATTGATTTTGTTCCCGATGCTATTATTCTAGGCTGCACGCATTTCCCACT
ATTGCAAAAACCCATCGCAGCCTATTTCCAAAACAAAAGCCTGCTCATCCACGCAGGAGAGGCGATTGTGCAATACATCA
CACAAAACTCACATCTACTTTTTGAAAGCAAAAAAAGCAGGAGCCTTTTGAGCACAAAAGCAGGTATTGTGGGGGATTTG
GTGGATGGGGCTCATAAACTGGATAATAAGACATGCAATAAAGCAGCGCAAATAAAAACACCACATGCTAGGAATTTAAA
TGCTAGGGCTAATAATCTACCAAGATGCAACCACACAACTCTGCAATTTTACGCCTCCAGCGATGAAAAAGGCCTCAAAA
ATACAGCACAAAACTGGCTCTCTAGCGCGAAAAATTTCACGATTTTGTAA

Protein sequence :
MKLGIFDSGAGGLSVLEHVLRAEIFDSIIYYGDTARLPYGTKHPDSIICFCLEALEFLLVQNVDIIIVACNTASAHALDA
MQKAAPKIPIIGVIEPGILAIKNRLKNLDAKILVLGTKATIQSAQYQRHLEKLGYSNITAIPTSLFVSLVEEGIFEGPLV
EECLRYYFGGIDFVPDAIILGCTHFPLLQKPIAAYFQNKSLLIHAGEAIVQYITQNSHLLFESKKSRSLLSTKAGIVGDL
VDGAHKLDNKTCNKAAQIKTPHARNLNARANNLPRCNHTTLQFYASSDEKGLKNTAQNWLSSAKNFTIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glr AAR03940.1 glutamate racemase Not tested cag PAI Protein 6e-61 58
glr AAC44708.1 Glr Not tested cag PAI Protein 9e-61 57
glr AAR03882.1 glutamate racemase Not tested cag PAI Protein 1e-61 57
HP0549 NP_207344.1 glutamate racemase Not tested cag PAI Protein 1e-60 57
glr AAR03971.1 glutamate racemase Not tested cag PAI Protein 1e-59 57
murI NP_223214.1 glutamate racemase Not tested cag PAI Protein 3e-59 56
glr AAR03910.1 glutamate racemase Not tested cag PAI Protein 3e-60 56
HP0549 BAD13991.1 - Not tested cag PAI Protein 2e-60 56
HP0549 BAD13881.1 - Not tested cag PAI Protein 3e-59 56