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Name : wbpO (HMU06600) Accession : YP_003516656.1 Strain : Helicobacter mustelae 12198 Genome accession: NC_013949 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 756402 - 757652 bp Length : 1251 bp Strand : - Note : evidence=ISS; db_xref=bavium:BAV0511; date=20070321; method=automatic:reciprocal fasta DNA sequence : ATGGATAAAATCGCAATTATTGGACTGGGCTATGTGGGACTACCCCTTGCCATCGCATTTGGGAGACACTACCCCACCAT CGGCTATGACATCAATGAGACTCGCATCAAGGAACTGCAGGAAAATTTTGATAGAAATGGACAAGTGGAGGATTTTGCCT CATCAAAAAAGCTTTCATTTTGCAAGGATAGGGACTCTCTCAAAGATTGCAATATCTACATCATCACTGTACCCACGCCT ATTGATGCGCACAAAAGACCAGACATCTCGCTGCTGCTAGGAGCCTCAAGGCTGGTAGGAGAATTCTTGCAAAAAGGAGA CATCGTGATCTATGAATCCACCACCTACCCCACTTGCACAAAAAAGCAATGTGTGCCAGTTTTGGAGGATGCAAGTGGGC TTGTCTTCAATGAGGACTTTTTCGTGGGATATTCTCCAGAGCGGATCAACCCAGGAGACAGTCTCCATACGCTAGAAAAT ATCACCAAAATCACCTCTGGCAGCACCAAGGAATCTGCAAAAAAAATCAATACTCTTTATCAAAGCATCGTGCAAGATAC CTATCTAGCCCCAAGTATCGAGATCGCAGAGGCTGCTAAAGCCATCGAGAATGCACAAAGGGATCTCAACATCGCTTTTG TCAATGAATTGAGTCTGATTTTTGACAAAATTGGCGTTGATACCCAAGAAGTGCTAAATGCTGCAAAAACCAAATGGAAT TTTCTGCCCTTTACCCCGGGGCTTGTGGGGGGGCACTGTATCAGCGTGGATCCCTATTATCTCATGCACATCGCCCATGA ATATGGCTACCATCCCAAAATCATCACTTCAGGGCGTCTCATCAATGATGCGATCCCAAGCTTCATCGCACAAAAAACCA TCAAGCTCCTGACCCAACACAAATCTAATCCCCTAAGTGCAAAGATAGGCATTTTTGGCGCGAGCTTCAAAGAGAATTGC AAAGATATTCGCAACGCAAAGGTATTTGAGGTTTATAAAGAACTCAAGGAATATGGTGTATGTGTGGAAATCTTTGATTC TTTAATCGATGTGAAAGAGGCCCAAAGCCACTATGGCATAGAGGTGCAGAAACTTGACAAACTGCAAGGAAAATATGAGG CATTGATCATCGCGATTCCTCATGAGGAATTTTTAGATTTTGATTATGCAGGGCATCTTGCTGAAAATGGCTTCATTTTT GACATCAAAGGAGTCCTGAAGAAAAAAACCAAAAATCTCTATAAACTTTAG Protein sequence : MDKIAIIGLGYVGLPLAIAFGRHYPTIGYDINETRIKELQENFDRNGQVEDFASSKKLSFCKDRDSLKDCNIYIITVPTP IDAHKRPDISLLLGASRLVGEFLQKGDIVIYESTTYPTCTKKQCVPVLEDASGLVFNEDFFVGYSPERINPGDSLHTLEN ITKITSGSTKESAKKINTLYQSIVQDTYLAPSIEIAEAAKAIENAQRDLNIAFVNELSLIFDKIGVDTQEVLNAAKTKWN FLPFTPGLVGGHCISVDPYYLMHIAHEYGYHPKIITSGRLINDAIPSFIAQKTIKLLTQHKSNPLSAKIGIFGASFKENC KDIRNAKVFEVYKELKEYGVCVEIFDSLIDVKEAQSHYGIEVQKLDKLQGKYEALIIAIPHEEFLDFDYAGHLAENGFIF DIKGVLKKKTKNLYKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 4e-89 | 52 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 4e-89 | 52 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 8e-88 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| wbpO | YP_003516656.1 | polysaccharide biosynthesis protein | VFG0431 | Protein | 2e-89 | 52 |
