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Name : tkt (HMU05700) Accession : YP_003516570.1 Strain : Helicobacter mustelae 12198 Genome accession: NC_013949 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 654772 - 656700 bp Length : 1929 bp Strand : + Note : evidence=ISS; db_xref=cjejuni:Cj1645; date=20070321; method=automatic:reciprocal fasta DNA sequence : ATGCTAGAAAAACAAGATTTGGTGATGCTAGAAAAAATGTCTAATACATTGAAATTTTTATGTGCAGATATGGTGCAGCA GGCAAACAGCGGGCATCCTGGCGTTGCCATGGGGTTGTCTGATGTAATGAGCGTACTAGGGATGCACTTAAAGATAAATC CCAAAAATCCCACCTGGATCAATCGCGATCGGATTGTCTTTAGTGGTGGACATGCATCTGCGCTTATTTATGCACTGCTG CATTTGTGGGGATTTGATGTAAGCTTGCAGGATCTCAAAGCCTTTCGTCAAAAAAATTCTAAAACTCCTGGGCATCCAGA ATTTGGACACACAGAGGGTGTAGAAATGACCACAGGTCCCTTAGGTCAGGGTGTGGCCAATGCAGTGGGATTTGCACTTG GAGCAAAGTATGCGCAAAAGCACTTTGGAAGTGCCATCGATCATAAAGTTTATTGTATTTGTGGGGATGGGGATTTGCAA GAGGGCATTAGCTATGAGGCAAGCTCTATTGCAGGACATCATAAGCTTAATAATCTTATTTTGCTCTATGATAGCAATCA CATCACTATTGAGGGGGATACAAGCATTGCTATTAGCGAGGATATTTCTCTGCGATTTGTATCTCAGGGATGGGAAGTCT TGGAATGTGATGGACATGATTTCATGGCTATTGATGCGGTGCTTAAACGTGCAAGAGAGGGGGAAGATGCACAGGGGCAA AAGAAACCAACGTTGATTATTATGCATACCAAGATTGGTAAAGGTGCAGTGGGGTTAGAGGGCAGTCACAAAACCCATGG CGCACCCCTGGGAGCAGATGTAATCAAAGCCAGTAAAGAGGCCCTAGGATTTGATGGCACACAAAGCTTCTTCATCCCTG AAGATGTGCTGCTGCGTTTTAGAAATGTCGCAGAGATGGGAGCTAGTGCCAATAAGATCTGGCAGGATCAAAATCAAGAT GCACAAAAACACATCCAAGCCTTTGTGCAAAGGGATTTTTCAAAAATTATTTATCCCAGATTTGAAAAAGGTGAGAAAAT CGCCACTAGAGTGAGCAATGGCAAGATTCTCAATGCTATCAGTGAGGCAGTGGCAGGATTTATCGGAGGGAGTGCGGATC TCTCTCCATCCAATAACACTAATCTAAACCACAGTCCCTCTTTCCCCGATGGGAAAAATCTGCATTTTGGCATCCGTGAG CATGCCATGGGAGGGATTAGTAATGGTCTGGCAAATTATGGATTATATCTGCCTTTTTGTGCGACATTTTTTGTCTTTAG TGACTATCTCTCTCCCAGCATTCGCATCGCAAGCATCATGCGCTCAAAAGTCTTTTATATTTTTACTCATGATAGCATTG GGGTTGGTGAAGATGGAGCCACGCATCAACCCATCGAGCAATTAAGCCATTTTCGAGCGATGCCAAATCTCATTGTCTAC CGCCCTGCAGATGCCAATGAAAACATCTCTTGTTGGAAGCATGCGCTGCATTATCAGGGTCCTTGCATGTTTGTACTTTC GCGCCAAAATCTTGAAGTTTGCACGCCCCAAAATAGTGATATATCCCAAGGTGCATATGTGCTAAAGCAGACTAAAAATG CCAGAATCACTTTGCTTGCCAGTGGTAGTGAAGTCTCTTTGGCGCTTAGAAGTGCGCAGGCTTTAGAGAGCGAGGGAATT ACTACGGGGGTGGTGAGTGTGCCAAGCCTTGATCTCTTTCTTGCCCAAGACAAAGCAAGGCAGAGGGATATCCTTGGTGA TGGTAGAGTGTTAGCTATTGAAGCAGCGCGCAGTTATGAATGGTATGCCTTGGCAGAGGATGTGGTGATGATGGAGGGTT TTGGCGCCTCTGCAAAGGGTGAGGAATTGTTTGAGAGTTTTGGATTTTGTGTGGCAAACATCCTCAAAAGAGCAAAGGCA TTGCTTTGA Protein sequence : MLEKQDLVMLEKMSNTLKFLCADMVQQANSGHPGVAMGLSDVMSVLGMHLKINPKNPTWINRDRIVFSGGHASALIYALL HLWGFDVSLQDLKAFRQKNSKTPGHPEFGHTEGVEMTTGPLGQGVANAVGFALGAKYAQKHFGSAIDHKVYCICGDGDLQ EGISYEASSIAGHHKLNNLILLYDSNHITIEGDTSIAISEDISLRFVSQGWEVLECDGHDFMAIDAVLKRAREGEDAQGQ KKPTLIIMHTKIGKGAVGLEGSHKTHGAPLGADVIKASKEALGFDGTQSFFIPEDVLLRFRNVAEMGASANKIWQDQNQD AQKHIQAFVQRDFSKIIYPRFEKGEKIATRVSNGKILNAISEAVAGFIGGSADLSPSNNTNLNHSPSFPDGKNLHFGIRE HAMGGISNGLANYGLYLPFCATFFVFSDYLSPSIRIASIMRSKVFYIFTHDSIGVGEDGATHQPIEQLSHFRAMPNLIVY RPADANENISCWKHALHYQGPCMFVLSRQNLEVCTPQNSDISQGAYVLKQTKNARITLLASGSEVSLALRSAQALESEGI TTGVVSVPSLDLFLAQDKARQRDILGDGRVLAIEAARSYEWYALAEDVVMMEGFGASAKGEELFESFGFCVANILKRAKA LL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 1e-104 | 41 |
