Gene Information

Name : hemC (HMU12610)
Accession : YP_003517238.1
Strain : Helicobacter mustelae 12198
Genome accession: NC_013949
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 1377634 - 1378581 bp
Length : 948 bp
Strand : -
Note : evidence=ISS; db_xref=cjejuni:Cj0545; date=20070321; method=automatic:reciprocal fasta

DNA sequence : 
ATGAGCAAACAAAATAGGCAAATCATCATCGGCACAAGGGGGAGTGCCCTAGCCCTCTGGCAGGCAGAGTATATCGCCAT
GCGCCTAAAAAAAGAGCTTGGCATAGAATCCAGGCTGCAGATTGTCAAGACCCAAGGAGATAGGATGCTAGATGTCCCAC
TTGCAAAAATTGGGGGCAAGGGATTGTTTACCAAGGAATTAGAAAAGCTGCTTTTGCAAGAAAAAATTGATATTGCTGTA
CACTCACTCAAAGACGTGCCTGTGGAATTTGTGGAGGGTTTGGATCTTGCCTGCATTACCAAGCGTGAAGATGTCAGGGA
TTGTTTTTTGAGTGTGCGTTATGCATCTATTTTGGACCTTCCTCCTGGTGCACGCGTGGGCACGACTTCCTTGCGTCGCT
CGATGCAATTAAAAATCCTGCGCAAAGATCTAGACACACAGTCTTTGCGCGGCAATGTGCAAACACGCTTAAAAAGACTT
TTTGATGGGGAATTTGATGCGATTATTTTGGCACAGGCTGGACTCAATCGTCTTGGGATTGATCAGCAAAAAGTGCCATT
TCTAAAGCCCTTTAGCACAGAGGAGTTGATTCCTGCTATGGGGCAAGGAGCATTGGGGATTGAGGCTAGGGAGGGGGATG
GGATTTTTTCACTTCTTCAGGGGCTCAATGATGAGGCCACTGCCATTTGCACAAACGCAGAGCGCACTTTCATCCGCGTG
CTTGATGGAGGTTGTCAGGTGCCAATTGGTGTGCATGCGCAATGCAATAATCAAGATTTTGTAATCCATGCGATCTTGGG
TTTGCCAGATGGCAGTAAGGTCCTAAGAGATTCCATCTCTGGCAGCACAAAAGATTCTATTTTGCTCGCAGAAAATCTCG
CAGAGCGTTTCCTCTCTCAAGGGGCGCTAGAGATTTTAGAGCAGGCCAAGGAGATGGCATTTCTTTAA

Protein sequence : 
MSKQNRQIIIGTRGSALALWQAEYIAMRLKKELGIESRLQIVKTQGDRMLDVPLAKIGGKGLFTKELEKLLLQEKIDIAV
HSLKDVPVEFVEGLDLACITKREDVRDCFLSVRYASILDLPPGARVGTTSLRRSMQLKILRKDLDTQSLRGNVQTRLKRL
FDGEFDAIILAQAGLNRLGIDQQKVPFLKPFSTEELIPAMGQGALGIEAREGDGIFSLLQGLNDEATAICTNAERTFIRV
LDGGCQVPIGVHAQCNNQDFVIHAILGLPDGSKVLRDSISGSTKDSILLAENLAERFLSQGALEILEQAKEMAFL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 6e-47 49
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 6e-47 49