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Name : katA (HMU10960) Accession : YP_003517077.1 Strain : Helicobacter mustelae 12198 Genome accession: NC_013949 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0753 EC number : 1.11.1.6 Position : 1220233 - 1221594 bp Length : 1362 bp Strand : + Note : evidence=ISS; db_xref=bparapertussis:BPP4406; date=20070321; method=automatic:reciprocal fasta DNA sequence : ATGCTCTTGGAAAACACATGGTTTTTAGAAAAACTCGCACACTTTGATAGGGAAAGAATCCCAGAGAGAGTAGTTCATGC CAAGGGTAGCGGTGCATATGGCACCTTCACGGTGACAAACGACATTACCAAATATACCAAGGCAAAGATTTTTAGCAAAG TCGGCAAAAAAACTCCCTGCTTCTTCCGCTTTTCAACAGTTGCTGGCGAGAGGGGTGCAGCAGATGCAGAGCGCGATCCT AGGGGATTTGCGATGAAATACTACACAGAGGAAGGAAACTGGGATTTGGTAGGAAACAACACCCCTATCTTTTTCATCAG AGATCCTTTGAAATTCCCTGATTTCATCCATACACAAAAGCGCAACCCAAAAACCAATCTCAGAGATATGACAGCTGCAT GGGATTTTTGGAGCCAGTGCCCAGAGTCTTTGCACCAAGTAACCATCCTCATGAGCGATCGTGGGATTCCCAAAAACTAC CGCCACATGCACGGATATGGCAGCCACACCTTTACCTTCATCAACGCAAAAAATGAAGTGTGCTTTGTGAAATTCCACCT AAAATCCATGCAGGGAATCCAAAATCTCACCAATGCAGAAGCAGAAAAAATCATTGGTATGGATAGAGAATCTCATCAAA GAGACTTGTTTAATGCCATTGAGCGCGGGGATTTCCCAAAATGGAGAATGTGCGTCCAAATCATGCCTATAAAAGATGCA AAAACCTACCGCTTCCACCCCTTCGATCTCACAAAAGTATGGAGCCATAAAGATTATCCACTTATCGAAGTAGGAATCGT AGAGCTCAACAGAAATCCTGAAAACTATTTTGCTGAGGTAGAACAAGCAGCTTTTGACCCCGCAAGTGTCGTGCCGGGCA TCGGATACAGCCCAGATAAAATGCTCCAAGGAAGACTCTTTGCCTATGGTGATACTGCAAGATACCGCCTTGGCATCAAC CATGGACAACTTCCTGTGAATGCTCCAAAAGTGCCTGTACACAATACCCACAGAGATGGATTTATGCAAAATGGGAATTA TGGAAGCTATATGAACTACAACCCAAGCTCTATCCCAGGATATCAAGAAGACCACAGCGTTAGAGTGCCTAAGTTCAATC CTGCATCCATCGAAAAAGAAACAGACATCTATGACTATGATTTCAGGGCAGACGATAGCGATTATTATACTCAGCCAGGA AATCTCTACAGACTCCTTAAGCCAGAAGAGCGCGAGAGACTCTGCCAAAACATCAAAGATGCGATGGAAGGAGTACCAGC TGATATCAAAAAACGCCAGATCGAACATTTCAAAAAAGCAGATCCTGCTTATGGTAAACGCGTAGAAGAACTAGTAATGT AA Protein sequence : MLLENTWFLEKLAHFDRERIPERVVHAKGSGAYGTFTVTNDITKYTKAKIFSKVGKKTPCFFRFSTVAGERGAADAERDP RGFAMKYYTEEGNWDLVGNNTPIFFIRDPLKFPDFIHTQKRNPKTNLRDMTAAWDFWSQCPESLHQVTILMSDRGIPKNY RHMHGYGSHTFTFINAKNEVCFVKFHLKSMQGIQNLTNAEAEKIIGMDRESHQRDLFNAIERGDFPKWRMCVQIMPIKDA KTYRFHPFDLTKVWSHKDYPLIEVGIVELNRNPENYFAEVEQAAFDPASVVPGIGYSPDKMLQGRLFAYGDTARYRLGIN HGQLPVNAPKVPVHNTHRDGFMQNGNYGSYMNYNPSSIPGYQEDHSVRVPKFNPASIEKETDIYDYDFRADDSDYYTQPG NLYRLLKPEERERLCQNIKDAMEGVPADIKKRQIEHFKKADPAYGKRVEELVM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 5e-138 | 64 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 3e-99 | 49 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 9e-97 | 48 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 9e-97 | 48 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 9e-97 | 48 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 9e-97 | 48 |
