|
Name : scoA (HMU10790) Accession : YP_003517062.1 Strain : Helicobacter mustelae 12198 Genome accession: NC_013949 Putative virulence/resistance : Unknown Product : succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A Function : - COG functional category : I : Lipid transport and metabolism COG ID : COG1788 EC number : 2.8.3.5 Position : 1200123 - 1200812 bp Length : 690 bp Strand : + Note : evidence=ISS; db_xref=bpseudomallei:BPSL1955; date=20070321; method=automatic:reciprocal fasta DNA sequence : ATGAACAAAATAGTAGAAAATCTCGATCTTGCTCTAAAAGATCTAAAAGATGGCATGACCGTGCTTGTTGGTGGTTTTGG ATTATGTGGGATCCCAGAATTTAGCATTACAAAAATCAGAGAATTGGGCACCAAAAACCTGATAGTTGTGAGCAATAATT GCGGTGTGGATGATTTTGGCCTGGGAATTTTGCTGCAAAATAAGCAAATCAAAAAAATGGTCGCTTCTTATGTCGGTGAA AACAAAACTTTTGAACAGCAATTCCTAAGCGGGGAACTAGAAGTAGAACTCACTCCACAGGGCACACTGGCCGAAAAATT GCGTGCTGGGGGTGCTGGGATTGCTGGATTTTATACACTCACTGGCGTTGGGACTGCTGTGGCCAAAGGAAAAGAAACCA AAAATTTTCACGGAAAAGAATATTTACTTGAAGAGGCGATAAAGGGGGATTTTGCTCTGGTAAAAGCAGACAAGGCTGAT AGACATGGCAATCTCATCTTCAACAAAACCGCAAGGAATTTCAATCCTATCTGCGCAATGGCTGCAAATACAACCATTGT AGAAGTAGAGGAAATTGTTGATTTTATTGATCCTGATTCCATCCACTTGCCAGGAATCTATGTGGATTTTGTGTATCTGG GCAGGGGATATGAAAAAAGAATCGAAAAAATTATTACAAGAAAGGATTAG Protein sequence : MNKIVENLDLALKDLKDGMTVLVGGFGLCGIPEFSITKIRELGTKNLIVVSNNCGVDDFGLGILLQNKQIKKMVASYVGE NKTFEQQFLSGELEVELTPQGTLAEKLRAGGAGIAGFYTLTGVGTAVAKGKETKNFHGKEYLLEEAIKGDFALVKADKAD RHGNLIFNKTARNFNPICAMAANTTIVEVEEIVDFIDPDSIHLPGIYVDFVYLGRGYEKRIEKIITRKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO18070.1 | unknown | Not tested | TTSS locus | Protein | 8e-35 | 44 |
