Gene Information

Name : Snas_0742 (Snas_0742)
Accession : YP_003509547.1
Strain : Stackebrandtia nassauensis DSM 44728
Genome accession: NC_013947
Putative virulence/resistance : Virulence
Product : betaine-aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.8
Position : 780924 - 782360 bp
Length : 1437 bp
Strand : -
Note : PFAM: Aldehyde Dehydrogenase; KEGG: scl:sce5007 putative aldehyde dehydrogenase (NAD(+))

DNA sequence :
ATGTCGCTATTCGAATACGCTCCCGCGCCCGAATCCCGCGCGATCGTCGACATCAAGCCGTCCTACGGCCTGTTCATCGA
CGGCGAGTTCGTCGACCCGAGTGACGGTTCGGCGTTCAAGTCGGTCAACCCCGCCAACGAGGAGATCCTCGCCGAGGTCT
CGTCCGCCGGGCAGGCCGACGTGGACGCGGCGATGACGGCCGCCCGGCGCGCCTACGACAAGGTGTGGGGCCCGATGCCG
GGCGCCGAACGCGCCAAGTACCTGTTCCGGATCGCCCGGCTCATCGCCGAACGCTCCCGGGAGCTGGCGGTGCTGGAGTC
ACTGGACAACGGCAAGCCGATCAAGGAGTCCCGCGACGTCGACCTGCCGCTGGTGTCGTCGTACTTCTTCTACTACGCGG
GCTGGGCCGACAAACTGGCCCACGCCGGTTTCGGTCCCGCGCCCAGGCCGCTCGGCGTCGCCGCGCAGGTGATCCCGTGG
AACTTCCCGCTGCTGATGCTGGCGTGGAAGATCGCGCCCGCGCTGGCCTGCGGCAACACCGTCGTCCTCAAACCCGCCGA
GACCACGCCGCTGACCGCGCTGGCCTTCGCCGAGATCTGCCAGCAGGCCGAGCTGCCGCCGGGCGTCGTCAACATCATCA
CCGGCGCCGGCGAAACCGGCCAGACGCTGGTGTCGCACCCCGGCGCCGCCAAGGTCGCGTTCACCGGCTCCACCCAGGTG
GGGCGTCAGATCGCCAAGGCCGTGGCGGGCACCGACAAGAAGCTCACCCTGGAGCTGGGCGGCAAGGCCGCCAACATCGT
CTTCGCCGACGCCGCGCTCGACCAGGCCGTCGAGGGCATCGTCAACGGCATCTTCTTCAACCAGGGGCACGTGTGCTGCG
CCGGTTCCCGGCTGCTGGTGCAGGAGTCGGTGGCCGAGGAGGTGCTGGAGAAACTCAAGCGCCGCATGGAGACCCTGCGG
CTGGGCGACCCGCTGGACAAGAACACCGACATCGGCGCCATCAACTCCGCCGAGCAGCTGGCCCGCATCAAGGACCTGAC
CGCCGCCGGTTCCGCCGAGGGCGCGCAGGCGTGGTCGCCCGCGTGCGACATCCCCGAGTCGGGGTTCTGGTTCGCGCCGA
CCGTCTTCACCGGCGTGTCGCAGGCGCACCGCATCGCCCGCGAGGAGATCTTCGGCCCCGTGCTGTCGGTGCTGACCTTC
CGCACCCCCGACGAGGCGATCGCCAAGGCCAACAACACCCCGTACGGACTCTCCGCGGGCGTGTGGACCGAGAAGGGTTC
GCGGATCCTGTGGGCCGCGACCGAGCTCAAGGCCGGAGTGGTGTGGGCGAACACGTTCAACAAGTTCGACGCGACCTCGC
CGTTCGGCGGGTTGAAGGAGTCCGGATACGGACGTGAGGGTGGCCGCCACGGCCTGGAGGCGTATCTCGATGTCTAA

Protein sequence :
MSLFEYAPAPESRAIVDIKPSYGLFIDGEFVDPSDGSAFKSVNPANEEILAEVSSAGQADVDAAMTAARRAYDKVWGPMP
GAERAKYLFRIARLIAERSRELAVLESLDNGKPIKESRDVDLPLVSSYFFYYAGWADKLAHAGFGPAPRPLGVAAQVIPW
NFPLLMLAWKIAPALACGNTVVLKPAETTPLTALAFAEICQQAELPPGVVNIITGAGETGQTLVSHPGAAKVAFTGSTQV
GRQIAKAVAGTDKKLTLELGGKAANIVFADAALDQAVEGIVNGIFFNQGHVCCAGSRLLVQESVAEEVLEKLKRRMETLR
LGDPLDKNTDIGAINSAEQLARIKDLTAAGSAEGAQAWSPACDIPESGFWFAPTVFTGVSQAHRIAREEIFGPVLSVLTF
RTPDEAIAKANNTPYGLSAGVWTEKGSRILWAATELKAGVVWANTFNKFDATSPFGGLKESGYGREGGRHGLEAYLDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-70 42
aldA ACK75580.1 aldehyde dehydrogenase Not tested VPI Protein 4e-51 41
aldA ACK75588.1 aldehyde dehydrogenase Not tested VPI Protein 4e-51 41
aldA ACK75585.1 aldehyde dehydrogenase Not tested VPI Protein 1e-50 41
aldA ACK75593.1 aldehyde dehydrogenase Not tested VPI Protein 1e-50 41
aldA ACK75574.1 aldehyde dehydrogenase Not tested VPI Protein 9e-51 41
aldA ACK75590.1 aldehyde dehydrogenase Not tested VPI Protein 9e-51 41
aldA ACK75596.1 aldehyde dehydrogenase Not tested VPI Protein 9e-51 41
aldA ACK75577.1 aldehyde dehydrogenase Not tested VPI Protein 6e-51 41
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-68 41
aldA ACK75582.1 aldehyde dehydrogenase Not tested VPI Protein 7e-51 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snas_0742 YP_003509547.1 betaine-aldehyde dehydrogenase VFG0082 Protein 7e-69 41