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Name : Snas_0064 (Snas_0064) Accession : YP_003508879.1 Strain : Stackebrandtia nassauensis DSM 44728 Genome accession: NC_013947 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 68185 - 71487 bp Length : 3303 bp Strand : - Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); protein of unknown function DUF472; protein of unknown function DUF471; protein of unknown function DUF470; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: xoo:XOO2872 lysy DNA sequence : ATGACGACGGTGAACAAGTCCGCGCCGGGTGGTTGGCGCGCCCGCATACCCACGGTGCTGGCCACGCTGATGGCGCTGTT GACCCTGATCGTGGCGCTGGCCGCGGTCGCCAGCGCGTTCCGCGACCGCACCGTCAAGGTGCGCGAGTTCGTCGAGATGG TGCTGATCCCGGCGCCACCGAACCTCGCCTATGCGGCCTTCCTGGCGATCTTCGCCGCCGCTGTCGCCCGCCGCAAACGG CTGGCCTGGTGGATCCTGGTCGGCTACTTCTCGCTCACGCTGGTGCTGCTGGCGCTGCTGAACACGATCGTGATCCTGGC ACCCGCGTTCGTGTTCGCCGACCCCGCTTCCGTTGAGGACACCCCCGGTTACGTGGTGCCCCGGCTGGTGCTGGCCACGT TCATCGCGATCGTCTTGCTGGTGCTGCTGCTGGTGGGCCGCTCGCAGTTCCCGGCCCGGGTGGGGCGCGGCAGCCTGTGG AAGGCGATCGGGGTGCTGGCCGCGCTGATGGCGATGTTCGTGCTCATCGGCTGGGGCCTGGTGTCGATGTTCCCCGGCAC GGTCACACACGGCGACCGGTTCCAGTACACCTTCGACAAGGTCGTCGGTGGGGCGCTGCGGTTCGAGATGACCCGCAGCG GCGTGGCACCCGGCTGGATCGACCTGCTGCTGGGCGCGTTCGGCGCGGTGGCGCTGCTGGCGGCGCTGTTCACGCTGTTC AAGTCGCAGCGGCTGGCCGCCGCCATGAACGCCTGGGACGAGGTGCGGCTGCGGGTGCTGCTGGCCGCACACGGCGAGGA CGACTCGCTGGGCTACTTCGCGACCCGGCGCGACAAGGCGGTGATCTACGCGCCCGGCGAGACCGCGGCGGTCACCTACC GCACCGTCACCGGCGTCTGTCTGGCCTCAGGCGACCCGATCGGCGACCCCGCCGACTGGCCGAAGGCCATCGATGCCTGG CTGCGGCAGGCGCGCGGCCACGGCTGGGTGCCCGCGGTGCTGGGCGCCAGCGAGGCGGGCGCCACCGCGTACCGGCAGGC GGGCCTGCGGGTGCGCGAGATCGGCGACGAGGCGATCCTGCTGCCCCGCGAGTACACACTAGACGGACGCGAGATGCGCC CGGTCCGGCAGGCGGTGGCGCGCATCGAACGGGCGGGCTACACCGCCCGGATCCGCCGCCACGGCGAACTGTCCGCATCG GAGATGGCCGCGGCGATCAAACGCGCCGACGACTGGCGCGACACCAAGACCGAACGCGGCTTCTCGATGGCGCTGTCCCG GTTCGGCGACGCCGACGACGCCGACAACGTGCTGGTCGAGGCCATCGACGGGATCGGCAAGGTGCGGGCCATGCTGTCCT TCGTGCCCTGGGGCCGCCGGGGCCTGTCGCTGGACCTGATGCGCCGGGAACGCGACGCCGACAACGGCCTGATGGAGTTC ATGGTCACCTCGCTGTGCCGCGAGGCCGGACGCCTGGGCGTGGACCGGATCTCGCTCAACTTCGCCATGTTCCGCGCCGT CTTCGAGGAGGGCGCCCGCATCGGCGCCGGACCGATCCTGCGCTGGTGGCGGCGTCTGTTGACCTTCTTCTCCCGCTGGT GGCAACTGGAGTCGCTGTACCGCTCCAACGTCAAATACCGTCCCCATTGGGCACCCCGCTACCTGTGTTACGGCGAACGC CGGGCACTGGGCCGGGTCGGGCTGGCCGCCGCGGTCGCCGAGGGCTTCCTGTCGGCCGACATCTCCCGGGTCTCCATCGG ACGGGCGGCCCGCGCCAAACCGCTGCCCGGCCTGGCCGAGGCACTCGCCGAAGCAGCCACCACCCCGACCGTCGACCCCA GAACCCGCCTGCCCGAACAGATGCGGGTCCGGCTGGACAAACTGGACCGACTGCGCGACGCCGGGGTCGAACCGTACCCG GTGGGCTTCGAACGGACCCTGGCCTGCGGCCAGGTCGCCCGCGACTTCCCGGACCTGCCGCCCGACGCCAACACCGGACG CTTCGTCGCGGTCGCCGGACGGGTGATGCTGCTGCGCCACCACGGGAAACTGTCCTTCGCGACCATAAGGGACTGGACCG GCGACCTCCAGGTCATGGTCGTCGGCGACTCTGACTTCCGCCACACCGTCGACATCGGCGACCACCTGGGCGTCGAAGGC GAGGTCGTCACCTCCAAACGCGGCGAACTGTCGGTGCTGTCGAAGAAGTGGACCCTGACCGCCAAGTGCCTGCACCCGTT GCCGGACAAGCACCTCGGCCTGGCCGACCCGGAGGCCAAGGTGCGGCAGCGTCACCTCGACCTCATCGTCAGCCCCCAGG CCCGCACCGACCTGCGAGCCCGCGGCGCCGTCATCCACTCACTGCGGACCGGCCTGCACGACGACGGGTACCTGGAGGTC GAGACCCCGATCCTGCAGGCGATCCACGGCGGGGCCAACGCCCGTCCGTTCGTCACCCACATCAACGCGTACGACATGCG GCTGTACCTGCGCATCGCGCCCGAGTTGTACCTCAAGCGACTGTGCGTCGGCGGCGTCGAGAAGGTCTTCGAACTCGGCC GGACGTTCCGCAACGAGGGCGTCTCGTTCAAGCACAACCCCGAGTTCACGATGCTGGAGGCGTACCAGTCCTACGCGGAC TACAACACGATGCGCGAGCTCACGATGCGACTGGTCCGCCAAGCCGCCGTCGCGGCCTTCGATACCACGGTCATCACCCG CGACGACCACGAGATCGACCTGGCCGCCGACTGGCCCGTCATCCCGATCCACCAAGCCATCTCCACCGCCCTCGGCGAGC ACATCGACCCGGGCACACCCCGCGACAAGCTCCGTCAGCTGTGCGAGGCGGCCGACATCCCCCTAGATCCACAATGGGAC GAGGGCGCCATCGTCCTCGAGATGTACGAGCGCCTGGTAGAACACGCCACCACCGCCCCAACGTTCTACAGCGACTTCCC CACCTCGGTCTCCCCGCTCACCCGCCAACACCGCACCGACCCGCGCCTGGCGGAACGCTGGGACCTGGTCGCGTTCGGCA CCGAGATCGGCACGGCCTACTCCGAACTGATCGACCCCGTCGAGCAGCGCCGCCGCCTCACCGAACAGTCGCTACTGGCA GCGGGCGGCGACCCGGAGGCAATGGAGCTCGACGAGGACTTCCTGGCCGCGCTCGAATACGCGATGCCCCCCACGGGCGG CCTCGGCATCGGCGTCGACCGGCTCGTCATGCTGCTGACCGGCAACGGCATCCGACAAACGCTGCCCTTCCCGCTGGTGA AACCCACAGTGGACCAGCCATGA Protein sequence : MTTVNKSAPGGWRARIPTVLATLMALLTLIVALAAVASAFRDRTVKVREFVEMVLIPAPPNLAYAAFLAIFAAAVARRKR LAWWILVGYFSLTLVLLALLNTIVILAPAFVFADPASVEDTPGYVVPRLVLATFIAIVLLVLLLVGRSQFPARVGRGSLW KAIGVLAALMAMFVLIGWGLVSMFPGTVTHGDRFQYTFDKVVGGALRFEMTRSGVAPGWIDLLLGAFGAVALLAALFTLF KSQRLAAAMNAWDEVRLRVLLAAHGEDDSLGYFATRRDKAVIYAPGETAAVTYRTVTGVCLASGDPIGDPADWPKAIDAW LRQARGHGWVPAVLGASEAGATAYRQAGLRVREIGDEAILLPREYTLDGREMRPVRQAVARIERAGYTARIRRHGELSAS EMAAAIKRADDWRDTKTERGFSMALSRFGDADDADNVLVEAIDGIGKVRAMLSFVPWGRRGLSLDLMRRERDADNGLMEF MVTSLCREAGRLGVDRISLNFAMFRAVFEEGARIGAGPILRWWRRLLTFFSRWWQLESLYRSNVKYRPHWAPRYLCYGER RALGRVGLAAAVAEGFLSADISRVSIGRAARAKPLPGLAEALAEAATTPTVDPRTRLPEQMRVRLDKLDRLRDAGVEPYP VGFERTLACGQVARDFPDLPPDANTGRFVAVAGRVMLLRHHGKLSFATIRDWTGDLQVMVVGDSDFRHTVDIGDHLGVEG EVVTSKRGELSVLSKKWTLTAKCLHPLPDKHLGLADPEAKVRQRHLDLIVSPQARTDLRARGAVIHSLRTGLHDDGYLEV ETPILQAIHGGANARPFVTHINAYDMRLYLRIAPELYLKRLCVGGVEKVFELGRTFRNEGVSFKHNPEFTMLEAYQSYAD YNTMRELTMRLVRQAAVAAFDTTVITRDDHEIDLAADWPVIPIHQAISTALGEHIDPGTPRDKLRQLCEAADIPLDPQWD EGAIVLEMYERLVEHATTAPTFYSDFPTSVSPLTRQHRTDPRLAERWDLVAFGTEIGTAYSELIDPVEQRRRLTEQSLLA AGGDPEAMELDEDFLAALEYAMPPTGGLGIGVDRLVMLLTGNGIRQTLPFPLVKPTVDQP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS1 | YP_005682181.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 6e-162 | 46 |
| lysS1 | YP_005684273.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 2e-162 | 46 |
| lysX | YP_003784331.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 2e-162 | 46 |
| lysS1 | YP_005686365.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 2e-162 | 46 |
