|
Name : Snas_5678 (Snas_5678) Accession : YP_003514401.1 Strain : Stackebrandtia nassauensis DSM 44728 Genome accession: NC_013947 Putative virulence/resistance : Unknown Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1004 EC number : 1.1.1.22 Position : 6040554 - 6041978 bp Length : 1425 bp Strand : - Note : KEGG: sit:TM1040_3775 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase DNA sequence : ATGCGCGCCAGCAGTACCAGTCTCCCCAACGAGGGCGAATCCATCGTCGCCTCCGGTTCGCCCCGCCCCCGCCTGACCTT CATCGGCGTGGGCCCGCTCGGCGGCACCTACGCCGCCTGTTACGCGGAGCTGGGCTACGAGGTACTCGGATACGACGTCG ACTCCGGCCGGATCGAGAAGTTCTCGGCCGGGGAGATGCCGTTCTACGAGCGCGGGCTGGACGACCTGGTGCGCAAGAAC GTCGACAACGGGCGGCTGCGCTTCACCACCGACCCCCAGGAGGTCGCCGACTTCGGTGACGTCCACTTCCTGTGCGTCGG CACCCCGCCGCGCAAGGACTCCGACTCCGCCGACCTGGCCTACATCGAGTCGGCGGTCACGACGCTGGCGCCGCTGCTGA CCCGCCGCTGCCTGCTGGTCGGCAAGTCCACCGTCCCGGTCGGCACCGCCGCCTGGGTGCAGCAGCTCATCGACAAGCAC TCCTCGCCCGACGTCGAGGTCGAGGTCGCCTGGAGCCCCGAGTTCCTGCAGGAGGCCAACGCCGTCGACGACGTGCTGCG CCCCAACCGGATCGTGCTGGCCGCCCAGAGCGAGTGGGCCGACGAACTGCTGCAGGCCGCCCACAAGGGAGTCTTCGAGC TGGCCGCGATGGAGGACCGGGAGGTGCCGCTGGTCAAGACCGACTTCGCCACCGCCGAACTGGTCAAGGTCGCCTCCAAC GCGTTCCTGTCCACCAAGATCTCGTTCATCAACGCGATGGCCGAACTGTGCGAGGCCTCCGGCGGCGACGTCAACGCGCT GGCCCGCGCCATGGGTTACGACTCCCGCATCGGCCACCGGTTCCTGCGCGCCGGTATCGGCTTCGGCGGCGGCTGCCTGC CCAAGGACCTGCGGGCGCTGGCCGCGCGCGGCAAGGAGCTGGGCGTCGGCGAGTCGATGCGGTTCCTGGCCGAGGTCGAG GACATCAACCTCAACCGCCGCACCAAGGTGGTCCGGCTGGCCGCCGAACTGTGCGGACGCGAGAACGGCCCCAACGGCCC GGAACTGTCCGGCCTGAACATCACCGTGCTGGGCGCGACCTTCAAGCCCGACACCGACGACGTCCGCGACTCCCCGGCCC TGGACATCGCCCGCCGCATGTCCAACGAGGGTGCCACCGTCACCGTCTACGACCCGATGGGCATGGACAACGCCCGGATG TTCCGCCCCGAACTGCGCTACGGACACACCCTCACCGAGGCCGTCGAAGGCGCCGACCTGGTGTGCGTCCTGACCGAGTG GGAAGAGTTCCGCCACGTCGACCCCGAGGCGCTGTCCGACCTGGTCGCCAAGCCCCGGATCCTGGACGGCCGCAACGCCC TCGACCCGCAGCTGTGGCGCAACGCCGGTTGGACCTACCGGGGGCTCGGCCGCGCTGCGGACTGA Protein sequence : MRASSTSLPNEGESIVASGSPRPRLTFIGVGPLGGTYAACYAELGYEVLGYDVDSGRIEKFSAGEMPFYERGLDDLVRKN VDNGRLRFTTDPQEVADFGDVHFLCVGTPPRKDSDSADLAYIESAVTTLAPLLTRRCLLVGKSTVPVGTAAWVQQLIDKH SSPDVEVEVAWSPEFLQEANAVDDVLRPNRIVLAAQSEWADELLQAAHKGVFELAAMEDREVPLVKTDFATAELVKVASN AFLSTKISFINAMAELCEASGGDVNALARAMGYDSRIGHRFLRAGIGFGGGCLPKDLRALAARGKELGVGESMRFLAEVE DINLNRRTKVVRLAAELCGRENGPNGPELSGLNITVLGATFKPDTDDVRDSPALDIARRMSNEGATVTVYDPMGMDNARM FRPELRYGHTLTEAVEGADLVCVLTEWEEFRHVDPEALSDLVAKPRILDGRNALDPQLWRNAGWTYRGLGRAAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| udgA | YP_005682185.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 2e-74 | 45 |
| udgA | YP_003784334.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 2e-74 | 45 |
| udgA | YP_005686369.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 2e-74 | 45 |
