Gene Information

Name : Snas_5642 (Snas_5642)
Accession : YP_003514365.1
Strain : Stackebrandtia nassauensis DSM 44728
Genome accession: NC_013947
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 5998321 - 5999013 bp
Length : 693 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pla:Plav_1100 ABC transporter related

DNA sequence : 
ATGTCCACCCCGGTGATAGAGCTGCGCGGGACCACGCGCCGCTACGACGAGGGGCCCCCGGCCCTCGACGACGTGTCGCT
GACGGTCGGCGCGGGCGAGGCGGTCGCGATCCTCGGGCCGTCCGGCAGCGGGAAGTCCACCATGCTGAACCTGATCGCGG
GGCTGGACCGGCCGAGCCAGGGCACCGTCACGGTGGACGGCACCCGGGTGGACGGGCTGTCCGAGGCCGCCTCGGCCCGG
TACCGGCGCGCCAAGGTCGGGATGGTGTTCCAGTTCTTCAATCTGCTGGACGACCTGACCGTGGCCGACAACGTGACGCT
GCCCGCGCTGCTGGCCGGGATGCGACGCCGCGAGGCCCGGTCGCGGGCGGCGGAACTGCTTGACTCGCTGGGCATCAAGC
GGCTGGCCGCCGCGCATCCGGCCCGGCTGTCGGGTGGGGAGCGGCAGCGGGTCGCGGTGGCGCGGGCGCTGATGAACCGT
CCGACACTGCTGCTGGCCGACGAACCGACCGGCGCCCTGGACTCGGCTTCGGGGCTGGAGGTGCGGCAGCTGCTCAACGA
ACTGCACGCTGACGGCCAGACGATCGTGCTGGTCACCCACGACCTGGCGCTGGCCGAGGCCTGCGCCACCCGCACCGTGC
GGCTTGTGGACGGTCATGTCGCCGCCGACACCGCGATGGAGCCGGTGCGATGA

Protein sequence : 
MSTPVIELRGTTRRYDEGPPALDDVSLTVGAGEAVAILGPSGSGKSTMLNLIAGLDRPSQGTVTVDGTRVDGLSEAASAR
YRRAKVGMVFQFFNLLDDLTVADNVTLPALLAGMRRREARSRAAELLDSLGIKRLAAAHPARLSGGERQRVAVARALMNR
PTLLLADEPTGALDSASGLEVRQLLNELHADGQTIVLVTHDLALAEACATRTVRLVDGHVAADTAMEPVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 6e-18 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-25 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-25 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-25 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snas_5642 YP_003514365.1 ABC transporter-like protein NC_008702.1.4606598. Protein 8e-34 48
Snas_5642 YP_003514365.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-36 44
Snas_5642 YP_003514365.1 ABC transporter-like protein CP001581.1.gene798.p Protein 7e-34 42