Gene Information

Name : Snas_5553 (Snas_5553)
Accession : YP_003514277.1
Strain : Stackebrandtia nassauensis DSM 44728
Genome accession: NC_013947
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 5900757 - 5901533 bp
Length : 777 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bgl:bglu_1g24570 lipoprotein releasing system, ATP-binding protein

DNA sequence : 
GTGAACGAGACGGTATTGAGTGGGACCGGCCTGGCCAAGAGCTTCGGCTCGACGCTCGCGCTGGCGGGGGTCGACTTCGG
CGTCCAGCGCGCCGAGGCGGTGGCCATCATGGGGCCCAGTGGTTCCGGCAAGTCGACGTTGCTGCACTGCCTGGCGGGCA
TCATGCGTCCCGACGCGGGCGAGGTGCGGCTGCTGGATCAGCGCATCGACACGATGTCGGAGGCGCAGCGCAGTCGCCTG
CGCCGCACCCGGTTCGGGTTCTTGTTCCAGTTCGGGCAGCTGTTGCCGGAGCTGACGGCGGTCGAGAACGTGGCGCTGCC
GTTGATGTTGGGCGGCACCGGCAAGTCCACCGCGCTGCGCGAGGCGCACCAGTGGTTCCCGAACCTGGGTCTCACCGGTC
TGGACAAGCGCCGCCCCGGCGAGCTGTCGGGCGGGCAGGCCCAGCGGGTGGCCCTGGCCCGCGCCCTGGTCTCGGGTCCG
GCGGTGGTGTTCGCGGACGAACCGACCGGCGCGCTGGACCAGGCGACCGGCACCGAGACGATGCGCACCCTGGTGGCCTC
GACGAAGGGCCAGCGGGCCAGTCTGATCGTGGTCACCCACGACGCCTCGGTGGCCGCCCACTGTGACCGGACGATCGAGA
TCCGCGACGGCCTGGTCACCTCCGACACCTCGCGACCCGCCCCCGTGGAAGCCTTGGCGCCCAGCGGTTCCGGCCAGCCT
GCCTCGACCACGTCCCCGATCCCCGGCTCCGTCCCGGGAAGGGCCGGTGCCTGGTAA

Protein sequence : 
MNETVLSGTGLAKSFGSTLALAGVDFGVQRAEAVAIMGPSGSGKSTLLHCLAGIMRPDAGEVRLLDQRIDTMSEAQRSRL
RRTRFGFLFQFGQLLPELTAVENVALPLMLGGTGKSTALREAHQWFPNLGLTGLDKRRPGELSGGQAQRVALARALVSGP
AVVFADEPTGALDQATGTETMRTLVASTKGQRASLIVVTHDASVAAHCDRTIEIRDGLVTSDTSRPAPVEALAPSGSGQP
ASTTSPIPGSVPGRAGAW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-28 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snas_5553 YP_003514277.1 ABC transporter-like protein NC_008702.1.4606598. Protein 9e-23 44
Snas_5553 YP_003514277.1 ABC transporter-like protein NC_012469.1.7686878. Protein 3e-29 44