Gene Information

Name : Snas_5376 (Snas_5376)
Accession : YP_003514101.1
Strain : Stackebrandtia nassauensis DSM 44728
Genome accession: NC_013947
Putative virulence/resistance : Resistance
Product : arsenical-resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0798
EC number : -
Position : 5711215 - 5712318 bp
Length : 1104 bp
Strand : -
Note : TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: smd:Smed_5054 arsenical-resistance protein

DNA sequence :
ATGCCCGTGACCAGCGCCCCCGACCTCGCCGCCACTGCGGCACCAGCCGCCCGCAAACTGTCGCTTGTCGACAAGCTGCT
GCCGGCGTGGATCCTCGTTGCCATGGCCGCCGGGCTCCTGCTGGGCCGCAGCATCCCCGGGCTCAACAGCGCCATGCAGG
CCATCGAGATCGGCGGAGTCTCCTTGCCCATTGCCCTGGGCTTGCTGTTGATGATGTATCCGGTGCTGGCCAAGGTCCGC
TACGACCGGCTCGACACCGTCACCGGCGACCGTCGGCTGCTGGTGTCGTCCCTGGTGGTCAACTGGCTCGTGGGCCCGGC
GGTGATGTTCGCGCTGGCCTGGATCTTCCTTCCCGACCTCCCGGAGTTCCGCACCGGGTTGATCATCGTCGGTCTGGCCC
GCTGCATAGCCATGGTCATCATCTGGAACGACCTGGCCTGCGGCGACCGCGAAGCCGCCGCCGTCCTCGTCGCATTGAAC
TCGGTGTTCCAGGTGCTCGCCTTCGGTCTGCTGGGATGGTTCTATCTGGACATCCTGCCAGGCTGGCTGGGACTGGCTCA
GTCCGATCTGGACGTTTCGGCGTGGTCGATCTTCGTCAACGTCCTGATCTTCCTGGGCATCCCGCTGGCCGCCGGATACC
TCACCCGCCGCCTGGGTGAACGCGCCAAGGGCCGTGACTGGTACGAGACCCGGTTCCTGCCCAAGATCGGCCCCATCGCC
CTGTACGGCCTACTGTTCACCATCGTCATCCTGTTCGCGCTGCAAGGCAAGGCCATCACCGCGCAACCCGGCGACGTCGC
CCGCATAGCGATTCCGCTACTGGTGTACTTCGCGCTCATGTGGGCCGGACCGTTCGCACTCGGCAAACTGATCGGCCTGG
GCTACGACCGCGCGACCACGCTGGCGTTCACCGCCGCGGGCAACAACTTCGAACTGGCCATCGCGGTAGCGATCGCGACG
TTCGGCGTCACCAGTGGCCAGGCCCTGGCCGGAGTCGTCGGGCCGCTGATCGAAGTACCAGTCCTGGTAGGACTCGTCTA
CGTCAGCCTCTGGGCCCGCCGATACTTCCCCGGCAACACACGCCCTCAGGAGGTGAATCGCTGA

Protein sequence :
MPVTSAPDLAATAAPAARKLSLVDKLLPAWILVAMAAGLLLGRSIPGLNSAMQAIEIGGVSLPIALGLLLMMYPVLAKVR
YDRLDTVTGDRRLLVSSLVVNWLVGPAVMFALAWIFLPDLPEFRTGLIIVGLARCIAMVIIWNDLACGDREAAAVLVALN
SVFQVLAFGLLGWFYLDILPGWLGLAQSDLDVSAWSIFVNVLIFLGIPLAAGYLTRRLGERAKGRDWYETRFLPKIGPIA
LYGLLFTIVILFALQGKAITAQPGDVARIAIPLLVYFALMWAGPFALGKLIGLGYDRATTLAFTAAGNNFELAIAVAIAT
FGVTSGQALAGVVGPLIEVPVLVGLVYVSLWARRYFPGNTRPQEVNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 3e-61 53
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 2e-76 51
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 1e-76 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snas_5376 YP_003514101.1 arsenical-resistance protein BAC0573 Protein 6e-80 51
Snas_5376 YP_003514101.1 arsenical-resistance protein BAC0004 Protein 1e-60 46