|
Name : Snas_5357 (Snas_5357) Accession : YP_003514083.1 Strain : Stackebrandtia nassauensis DSM 44728 Genome accession: NC_013947 Putative virulence/resistance : Resistance Product : D-Ala-D-Ala dipeptidase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG2173 EC number : 3.4.13.22 Position : 5693804 - 5694412 bp Length : 609 bp Strand : + Note : PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; KEGG: sfu:Sfum_0509 peptidase M15D, VanX D-ala-D- ala dipeptidase DNA sequence : ATGAGCGACGACTTTGTCTTCGTGGACGAGGCCGTTCCCGGAATCCGTTGGGACGCCAAGTACGCCACCTGGGACAACTT CACCGGCAAACCGGTCGACGGCTACCTGGTCAACCGCATCCTGGGCACCCGCGCGCTATGCGCGGCTCTCGAACGAGCCC GCAAAGAAGCCGCGTCCCTCGACTTCGGCCTACTCCTGTGGGACGGCTACCGCCCCCAACGCGCCGTCGACCGCTTCATG CGCTGGTCAGAACAACCCGAAGACGGCCGCACCAAACGACGCCACTACCCGAACATAGCCAGAACCGAAATGTTCGAACT AGGCTATGTAGACGCCAAATCCGGCCACAGTCGAGGCAGCACCGTCGACCTCACCCTCTACCACCTGGCCACCGGCGAAC TCGTCCCCATGGGCGGCGACCACGACCTGATGGACCCGGTCTCCCACCACGGAGCGACCGGAATCACCCCAACCGAAGCC GAGAACCGCCGCCACCTCCGCTCCATCATGGAGACCGCCGGTTTCCGCGCGTACCCCTACGAATGGTGGCACTACACGCT GGAGGACGAGCCCTACCCCGACACCTACTTCGACTTCCCCATCACATGA Protein sequence : MSDDFVFVDEAVPGIRWDAKYATWDNFTGKPVDGYLVNRILGTRALCAALERARKEAASLDFGLLLWDGYRPQRAVDRFM RWSEQPEDGRTKRRHYPNIARTEMFELGYVDAKSGHSRGSTVDLTLYHLATGELVPMGGDHDLMDPVSHHGATGITPTEA ENRRHLRSIMETAGFRAYPYEWWHYTLEDEPYPDTYFDFPIT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vanXB | YP_008394260.1 | D-alanyl-D-alanine dipeptidase | Not tested | Not named | Protein | 1e-63 | 64 |
| vanX | NP_815950.1 | D-alanyl-D-alanine dipeptidase | Not tested | Not named | Protein | 3e-64 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Snas_5357 | YP_003514083.1 | D-Ala-D-Ala dipeptidase | U82965.2.orf32.gene. | Protein | 2e-82 | 85 |
| Snas_5357 | YP_003514083.1 | D-Ala-D-Ala dipeptidase | AF155139.2.orf6.gene | Protein | 2e-65 | 67 |
| Snas_5357 | YP_003514083.1 | D-Ala-D-Ala dipeptidase | AF130997.1.orf5.gene | Protein | 5e-66 | 66 |
| Snas_5357 | YP_003514083.1 | D-Ala-D-Ala dipeptidase | M97297.gene.p01 | Protein | 2e-63 | 65 |
| Snas_5357 | YP_003514083.1 | D-Ala-D-Ala dipeptidase | NC_014475.1.orf4.gen | Protein | 2e-63 | 65 |
| Snas_5357 | YP_003514083.1 | D-Ala-D-Ala dipeptidase | NC_005054.2598281.p0 | Protein | 2e-63 | 65 |
| Snas_5357 | YP_003514083.1 | D-Ala-D-Ala dipeptidase | AF310956.2.orf6.gene | Protein | 4e-64 | 64 |
| Snas_5357 | YP_003514083.1 | D-Ala-D-Ala dipeptidase | AE016830.1.gene2249. | Protein | 8e-65 | 64 |
| Snas_5357 | YP_003514083.1 | D-Ala-D-Ala dipeptidase | U35369.1.gene7.p01 | Protein | 2e-64 | 64 |
| Snas_5357 | YP_003514083.1 | D-Ala-D-Ala dipeptidase | FJ349556.1.orf5.gene | Protein | 1e-61 | 63 |
