|
Name : Snas_5356 (Snas_5356) Accession : YP_003514082.1 Strain : Stackebrandtia nassauensis DSM 44728 Genome accession: NC_013947 Putative virulence/resistance : Resistance Product : D-alanine--D-alanine ligase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1181 EC number : 6.3.2.4 Position : 5692767 - 5693807 bp Length : 1041 bp Strand : + Note : KEGG: pfs:PFLU0706 D-alanine--D-alanine ligase A; TIGRFAM: D-alanine/D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP- grasp; protein of unknown function DUF201; phosphoribosylgl DNA sequence : ATGGCTAAGTCCAAGGTCGGCATCGTATTCGGAGGCGCGTGCGAGGAGAACCCCGTCTCCGTCAAGTCCGCACAAGAGGT CGCCAGAAACCTCGACACCGACAAATACGAAGTGCTCTACATCGGCATCACGAAAACCGGCGACTGGCTGCTGTGCGACA GCCCCGACACCGGCTGGGAGACCACCAAAAACCGTCCCGCCGTCCTGTCACCCGACAGAAACGTCCACGGACTCCTCGTC CTCGAAAACGGGAAATACGAAACGATCCGCCTGGACCTGGTCTTCCCCGTCCTACACGGCAAACTCGGCGAAGACGGCGC GATCCAAGGCCTGCTCGAACTGTCCGGCATCCCCTACGTAGGCTGCGACGTCCAAACCTCCGCTCTGTGTATGGACAAGT CCCTCACCTACCTGGTCGCCCAACACGCGGGAATCACGACACCGCAGTACTGGATCGTCACGGCGAACAAGGACATCGAA CCCGACCGCCTCCCCTACCCCGTCGTGGTGAAACCAGCCCGATCCGGCTCATCCTTCGGCGTCAACAAGGTCACCCACGA AGAAGAACTCCAAACCGCGATCGACACCGCCCGCCAGTACGACTCGAAGGTTCTCATCGAAGAAGCCATCGTCGGCACCG AAGTCGGATGCTCCATATTGGGCGAGCGATACGGACTGGTAGCGGGCGAAGTGGACCAGATCAACGTCTCCCAAGGCATC TTCAGAATCCACCAGGAGAACAACCCCGAAAGCGGCTCCGAGAACTCCACCATCACCGTTCCCGCCGACATCTCCCTGGA ATCACGATCCCTCGTCCAGGAGACAGCCAAAACCCTCTACCGCGCCCTCGGCGGCAAAGGCCTCGCCCGCATCGACTTCT TCCTAAAAGAAGACGGAACCCTGGTCCTCAACGAAGTACAGACCCTGCCCGGCATGACCTCCTACAGCCGCTACCCACGA ATGATGGCCGCCGCGGGAATCCCGATGGCCGACCTCATCGACCGCATGGTCTCCCTGACCCTGAACGGAAAACGGCGATG A Protein sequence : MAKSKVGIVFGGACEENPVSVKSAQEVARNLDTDKYEVLYIGITKTGDWLLCDSPDTGWETTKNRPAVLSPDRNVHGLLV LENGKYETIRLDLVFPVLHGKLGEDGAIQGLLELSGIPYVGCDVQTSALCMDKSLTYLVAQHAGITTPQYWIVTANKDIE PDRLPYPVVVKPARSGSSFGVNKVTHEEELQTAIDTARQYDSKVLIEEAIVGTEVGCSILGERYGLVAGEVDQINVSQGI FRIHQENNPESGSENSTITVPADISLESRSLVQETAKTLYRALGGKGLARIDFFLKEDGTLVLNEVQTLPGMTSYSRYPR MMAAAGIPMADLIDRMVSLTLNGKRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vanB | NP_815951.1 | D-alanine--D-lactate ligase | Not tested | Not named | Protein | 3e-104 | 62 |
| vanB | YP_008394259.1 | Vancomycin B-type resistance protein vanB, D-alanine--D-lactate ligase | Not tested | Not named | Protein | 3e-106 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Snas_5356 | YP_003514082.1 | D-alanine--D-alanine ligase | AF310956.2.orf5.gene | Protein | 8e-106 | 62 |
| Snas_5356 | YP_003514082.1 | D-alanine--D-alanine ligase | U00456.gene.p01 | Protein | 1e-104 | 62 |
| Snas_5356 | YP_003514082.1 | D-alanine--D-alanine ligase | AY145441.gene.p01 | Protein | 5e-106 | 62 |
| Snas_5356 | YP_003514082.1 | D-alanine--D-alanine ligase | U35369.1.gene6.p01 | Protein | 1e-104 | 62 |
| Snas_5356 | YP_003514082.1 | D-alanine--D-alanine ligase | AE016830.1.gene2250. | Protein | 1e-104 | 62 |
| Snas_5356 | YP_003514082.1 | D-alanine--D-alanine ligase | NC_005054.2598280.p0 | Protein | 5e-107 | 61 |
| Snas_5356 | YP_003514082.1 | D-alanine--D-alanine ligase | NC_014475.1.orf3.gen | Protein | 5e-107 | 61 |
| Snas_5356 | YP_003514082.1 | D-alanine--D-alanine ligase | AF130997.1.orf4.gene | Protein | 1e-102 | 59 |
| Snas_5356 | YP_003514082.1 | D-alanine--D-alanine ligase | AF277571.gene.p01 | Protein | 1e-104 | 59 |
| Snas_5356 | YP_003514082.1 | D-alanine--D-alanine ligase | AY489045.gene.p01 | Protein | 1e-101 | 58 |
| Snas_5356 | YP_003514082.1 | D-alanine--D-alanine ligase | AF162694.gene.p01 | Protein | 7e-55 | 41 |
