Gene Information

Name : Snas_4940 (Snas_4940)
Accession : YP_003513674.1
Strain : Stackebrandtia nassauensis DSM 44728
Genome accession: NC_013947
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG5006
EC number : -
Position : 5250002 - 5250913 bp
Length : 912 bp
Strand : -
Note : PFAM: protein of unknown function DUF6 transmembrane; KEGG: rle:RL0285 putative transmembrane transporter protein

DNA sequence :
ATGAACCGCGAACTGCGCGATATCGCCATCACCGCCCTGGCTCCCGTCATGTGGGGCACCACCTACATCGTCACGACCGA
ACTGCTGCCGCCCGGCCGTCCGCTGCTGACCGCGCTGTTGCGCGCCCTGCCCGCCGGGCTGCTGTTGGTCGTGTTGGCCC
GCAAGCTTCCCCAGGGCTCGTGGTGGTGGAAGGCCAGCGTCATCGGGGCCCTGAACATCGCGGCCTTCTTCGCGTTGCTG
TTCATCGCCGCCTACCGGCTGCCCGGCGGCGTCGCCGCCGTGGTCTCGGCCATCGGTCCACTGGTGACCGCGGGCATGAC
GATCCTGATCCTCAACCAGAAGGTGCGGCTGCGGACCTGGCTGCTGGGCATCGCCGGGGTCGCCGGAGTCGCGATGGTCA
TGCTCAACGCCGCCGCGAAACTCGACGCGCTGGGCATGATCGCCGGACTGGCCGCCGCCACGTCCATGGCCGTGGCGACC
ACCCTCACCAAACGCTGGGGCGCCCCGACCGGTGCCGGTTCGGCGGCGCTGGCGGGCTGGCAGCTGACGGCCGGTGGCCT
GTTCCTGCTGCCGTTCGCGTTGATCATCGAGGGCGGCATTCCGGCGCTGAGCCTGACCAACGTCGCCGGATACGTCTACC
TCGGCCTGGTCAACACCGCGCTGGGCTACTGGCTGTGGTTCCGGGGCATCTCGCGACTGTCGGTGGCGCCGTTGAGCTTC
CTGGGTCTGCTGTCGCCGCTGACCGCCGCGACCGTCGGCTGGATCGTCCTGGGCGAGGCGCTGACCCCGCTGCAACTGCT
GGGCATGGTCGTCGCCTTCGGCGCCACCGTCGCCGGACAGCTCACCTCGGTGAGGCGGCCCGCCGTCGTCCCGCAGGCCA
CGCCGCGAGCCGAACTGGCGAAGGCGTCCTAG

Protein sequence :
MNRELRDIAITALAPVMWGTTYIVTTELLPPGRPLLTALLRALPAGLLLVVLARKLPQGSWWWKASVIGALNIAAFFALL
FIAAYRLPGGVAAVVSAIGPLVTAGMTILILNQKVRLRTWLLGIAGVAGVAMVMLNAAAKLDALGMIAGLAAATSMAVAT
TLTKRWGAPTGAGSAALAGWQLTAGGLFLLPFALIIEGGIPALSLTNVAGYVYLGLVNTALGYWLWFRGISRLSVAPLSF
LGLLSPLTAATVGWIVLGEALTPLQLLGMVVAFGATVAGQLTSVRRPAVVPQATPRAELAKAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pecM AGK07028.1 PecM Not tested SGI1 Protein 8e-36 46
pecM AGK07086.1 PecM Not tested SGI1 Protein 8e-36 46
pecM ACN81012.1 PecM Not tested AbaR5 Protein 1e-35 46
pecM CAJ77067.1 Regulatory protein Not tested AbaR1 Protein 8e-36 46