Gene Information

Name : Snas_4896 (Snas_4896)
Accession : YP_003513630.1
Strain : Stackebrandtia nassauensis DSM 44728
Genome accession: NC_013947
Putative virulence/resistance : Virulence
Product : glutamine synthetase type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 5201259 - 5202698 bp
Length : 1440 bp
Strand : +
Note : TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: gur:Gura_2228 glutamine synthetase, type I

DNA sequence : 
ATGAGGAACCCAGCAGTGTTCACCAGTCCCGATCAGCTTCTGGCCTACATCAAGGACAACAAGGTCAAGTTCATCGACGT
CCGATTCTGTGACCTGCCGGGGGTGATGCAGCACTTCAACGTTCCCGCCGAATCCTTCACCGAGGAGACCTTCGCCGAGG
GCCTGGCCTTCGACGGTTCCTCGATCCGCGGCTTCCAGGCGATCCACGAATCCGACATGCTGCTGCTGCCCGACGTCACC
ACCGCCTTCCTGGACCCGTTCCGGGCCGAGAAGACCGTGGCGCTGAACTTCTTCATCCACGACCCGTTCACCCGCGAGGC
CTACAGCCGCGACCCGCGCAACATCGCCAAGAAGGCCGAGCAGTACCTGGCCTCGTCGGGCATCGCCGACACCGCGTACT
TCGGCGCCGAGGCGGAGTTCTACATCTTCGACGACGTGCGCTTCGACACCGCCCCACAACACGGTTTCTTCCACATCGAC
TCGGTCGAGGGCGCCTGGAACTCCGGGAAGGTGGAAGAGGGCGGCAACCGCGGCTACAAGCCCAAGCACAAGGGCGGCTA
CTTCCCGGTCCCGCCGGTCGACCACTTCGCCGACCTGCGCGACGGCATCGTACGAACCCTTGTGGACACCGGCATCGAGG
TGGAACGGGCCCACCACGAGGTCGGCACCGCGGGCCAGACCGAGATCAACTACAAGTTCTCGACCCTGCTCAACGCGGGC
GACCAGCTCCAGCTGTTCAAGTACATCGTCAAGAACCAGGTGTGGGCCGCCGGTAAGACCGCGACCTTCATGCCCAAGCC
CATGTACGGCGACAACGGTTCCGGCATGCACACCCACCAGAGCCTGTTCCGCGACGGCACTCCCCTGTTCTACGACGAGA
CCGGCTACGCGGGTCTGTCCGACACGGCCCGCTGGTACATCGGCGGCCTGCTCAAGCACGCCCCGTCGCTGCTGGCGTTC
ACCAACCCGACGGTCAACTCCTACCGCCGCCTGGTCCCGGGCTACGAGGCCCCGGTGAACCTGGTCTACTCGCAGCGCAA
CCGTTCCGCGTGCACCCGGATCCCGGTCACCGGCAACAACCCGAAGGCCAAGCGGGTCGAGTTCCGGGTCCCCGACCCGT
CCTCCAACCCGTACCTCGCCTTCTCGTCGATGCTGATGGCGGGCCTGGACGGCATCAAGAACAAGATCGAGCCGCCGGAC
CCGGTCGACAAGGACCTGTACGAGCTGGCGCCCGAGGAGTTCGGTGACGTGGCCCAGGTCCCGGGTTCGCTGCCGGAGGT
GCTCGACAAGCTGGAGTCCGACCACGGCTTCCTGCTGGAGGGCGGCGTGTTCACGCCGGACCTGATCGAGACCTGGATCG
ACTACAAGCGCACCGCCGAGGTCGACGAGATCCGGCTGCGGCCCACCCCGCAGGAGTTCCTGCTCTACTTCGACGTCTAA

Protein sequence : 
MRNPAVFTSPDQLLAYIKDNKVKFIDVRFCDLPGVMQHFNVPAESFTEETFAEGLAFDGSSIRGFQAIHESDMLLLPDVT
TAFLDPFRAEKTVALNFFIHDPFTREAYSRDPRNIAKKAEQYLASSGIADTAYFGAEAEFYIFDDVRFDTAPQHGFFHID
SVEGAWNSGKVEEGGNRGYKPKHKGGYFPVPPVDHFADLRDGIVRTLVDTGIEVERAHHEVGTAGQTEINYKFSTLLNAG
DQLQLFKYIVKNQVWAAGKTATFMPKPMYGDNGSGMHTHQSLFRDGTPLFYDETGYAGLSDTARWYIGGLLKHAPSLLAF
TNPTVNSYRRLVPGYEAPVNLVYSQRNRSACTRIPVTGNNPKAKRVEFRVPDPSSNPYLAFSSMLMAGLDGIKNKIEPPD
PVDKDLYELAPEEFGDVAQVPGSLPEVLDKLESDHGFLLEGGVFTPDLIETWIDYKRTAEVDEIRLRPTPQEFLLYFDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 6e-91 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snas_4896 YP_003513630.1 glutamine synthetase type I VFG1399 Protein 9e-170 68