Gene Information

Name : Snas_4480 (Snas_4480)
Accession : YP_003513218.1
Strain : Stackebrandtia nassauensis DSM 44728
Genome accession: NC_013947
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4776879 - 4777649 bp
Length : 771 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lch:Lcho_4268 ABC transporter-related protein

DNA sequence : 
TTGACCACAACGACAACCGCCGCCGCGCGGGCGCACAACGTCTGGAAGGTGTACGGCACCGGTGAGGCGCAGGTCATCGC
GTTGCACGGCGTCAGCGCGGAGTTCGGCGCCGGACAGTTCACGGCGATCATGGGCCCCTCGGGGTCGGGTAAGTCGACGC
TCATGCACTGCCTGGCCGGCCTCGACCACACCAACCGGGGCGAGGTCCACATCGGCGACACGAAGGTCACCGGCCTGTCC
GACCGGGGGCTGACGAAACTGCGCCGCCAGAAGGTCGGCTTCATCTTCCAGCAGTTCAACCTGCTGCCGACGCTGACCGC
ACAGGAGAACATCCTGCTGCCGCTGTCCATCGCGAAGCAGAAGCCCGACGCGGCCTGGTTCGACCGGGTCATCGACACCG
TCGGACTGCGCGACCGGCTGTCCCACCGGCCCTCGCAGCTGTCGGGCGGCCAGCAGCAGCGCGTCGCGTGCGCCCGGGCG
CTGGTGCAGCGGCCCGAGGTGATCTTCGCCGACGAGCCCACCGGAAACCTGGACTCCCGTTCGGGCACCGAGGTGCTGAA
GTTCCTGCGCGACTCGGTCGACCAGTTCGGACAGACCATTGTGATGGTCACGCACGACCCGGTCGCGGCGTCCTACGCCG
ACCGGGTGCTGTTCCTGGCCGACGGCCGGGTGGTGGACGAGATGCTCGAACCCACCGCCGACCGGGTGCTGGACGAACTG
AAGCGCTTCGAGGAGATCGTCGACTCGGTCAAGGCCGGGGAGGCTCGCTAG

Protein sequence : 
MTTTTTAAARAHNVWKVYGTGEAQVIALHGVSAEFGAGQFTAIMGPSGSGKSTLMHCLAGLDHTNRGEVHIGDTKVTGLS
DRGLTKLRRQKVGFIFQQFNLLPTLTAQENILLPLSIAKQKPDAAWFDRVIDTVGLRDRLSHRPSQLSGGQQQRVACARA
LVQRPEVIFADEPTGNLDSRSGTEVLKFLRDSVDQFGQTIVMVTHDPVAASYADRVLFLADGRVVDEMLEPTADRVLDEL
KRFEEIVDSVKAGEAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-39 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-41 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-41 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-41 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-31 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snas_4480 YP_003513218.1 ABC transporter-like protein CP001581.1.gene798.p Protein 4e-43 46
Snas_4480 YP_003513218.1 ABC transporter-like protein NC_008702.1.4606598. Protein 3e-37 45
Snas_4480 YP_003513218.1 ABC transporter-like protein CP001581.1.gene598.p Protein 9e-46 44
Snas_4480 YP_003513218.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-41 44