Gene Information

Name : Snas_3784 (Snas_3784)
Accession : YP_003512534.1
Strain : Stackebrandtia nassauensis DSM 44728
Genome accession: NC_013947
Putative virulence/resistance : Virulence
Product : transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4779
EC number : -
Position : 4040824 - 4041843 bp
Length : 1020 bp
Strand : -
Note : PFAM: transport system permease protein; KEGG: yen:YE3620 iron-enterobactin transporter permease

DNA sequence : 
GTGACCCTCCTCCTCGTCAAGACCGGTGACCGGTTCGTGCGCGTCGAACGCCGCACCGCCGTGCTGTCGATCGCCCTGGT
CGCCACGATTCTCACCGTCGGCCTGCTGGGCCTGTGCTACGGGGCCTCGTGGAAGAGCCCCGGCGACGTGATCGCCGCGT
TGGCCGGAACCGGCGACTCGGTCGTCGTCGTACGCGACTGGCGGCTGCCGCGCGTCCTGGCCGCCATCGTCTTCGGCGCC
GCCCTCGGCGTGGCCGGGGCGATCTTCCAGAACCTCACCCGCAACCCGCTGGGCAGCCCCGACGTCATCGGCCTGGACGC
CGGTGCCTACACCGGCACCCTCGTGGCCCTGACCGTCCTGTCGGGAACATCGGTGCAACTGGCGACCAGCTCCGTCATCG
GCGGTCTGCTCGTGGCCGCGACGATCTACCTGCTGGCGATGCGCGGCGGCGTCTCCGGGCTGCGGCTGATCATCATCGGC
ATCGCCGTCAACGCGATGGTGACCGCGCTGAACTCCTGGATCGTGCTGCGCGCCGAACTGGAGGTCGCGATCGCCGCCGT
CGGCTGGAGCGCGGGCTCCCTCAACGGCGTCGACTGGGCCGACGTGGCACTGCCGTTGGCCATCATCGTGGTGCTGTTGG
CCGCCATGGTCACCCGCGCCGGGGCGGTACACCAGGCCGCGCTGGGCAACGCCGTGGCCGCCACCACCGGGGTGCGGCTG
GGCCGGTTGCGGCTGACGATGATCGCCATCGGCGTCGGCCTCACCGCGACGGTCACCGCCGTGGCCGGGCCGATCGCGTT
CATCGCGCTGGCCGCCCCGCAGATCGGCCGCCGCCTGGCGCGCGCCCCCGGGGTGCCGCTGCTCCCGGCCGCCCTGTGCG
GCGCGGTGTTGTTGCAGGTGGCCGACCTGGGCGCGCAACTGCTGCTGGCGCCGGTGTCGCTGCCGGTCGGCGTCGTCACC
ACCGCCATCGGCGGGGCTTACCTGATCTGGCTGTTGACCACCGAGGTGAAACGCTCATGA

Protein sequence : 
MTLLLVKTGDRFVRVERRTAVLSIALVATILTVGLLGLCYGASWKSPGDVIAALAGTGDSVVVVRDWRLPRVLAAIVFGA
ALGVAGAIFQNLTRNPLGSPDVIGLDAGAYTGTLVALTVLSGTSVQLATSSVIGGLLVAATIYLLAMRGGVSGLRLIIIG
IAVNAMVTALNSWIVLRAELEVAIAAVGWSAGSLNGVDWADVALPLAIIVVLLAAMVTRAGAVHQAALGNAVAATTGVRL
GRLRLTMIAIGVGLTATVTAVAGPIAFIALAAPQIGRRLARAPGVPLLPAALCGAVLLQVADLGAQLLLAPVSLPVGVVT
TAIGGAYLIWLLTTEVKRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagB YP_005682398.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 7e-48 43
fagB YP_003782431.1 integral membrane protein Not tested PiCp 1 Protein 7e-48 43
fagB YP_005684489.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 7e-48 43
fagB YP_005680308.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 4e-48 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snas_3784 YP_003512534.1 transporter permease VFG0928 Protein 3e-43 48