Gene Information

Name : Snas_3783 (Snas_3783)
Accession : YP_003512533.1
Strain : Stackebrandtia nassauensis DSM 44728
Genome accession: NC_013947
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 4040027 - 4040827 bp
Length : 801 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dac:Daci_3149 ABC transporter related

DNA sequence : 
ATGAACGACAACGCCCACCCCGTGCGGCTGTCCGCCCGCGACCTGACCCTGCGCTACGGCGACCGGGTGGTGGCCACCGG
TCTGAGCCTCGACATCCCCGACCGGGCGTTCACCGTGATCGTCGGACCCAACGCCTGCGGCAAGTCCACACTGCTGCGAG
CCCTGGTGCGACTGCTGCGCCCCGCCGAGGGCTCCGTCCGGCTCGACGAGGCCGACCTGGCCGCGCACCCGGCGAAACAA
CTGGCCCGGACCCTGGGCTTCCTGCCGCAGGATCCACTGTCGCCGGACGACATCAAGGTGCGGCAACTGGTCGCGCGGGG
CCGGTACCCGCACCAGTCGGCGCTGTCGCTGTGGTCGCGCGCCGATGAGGAGGCCGTCGCCGAGGCCATGGCCACCGCCG
GAGTCGCCGACCTGTCCGAACGGCTGGTCACCGAACTGTCGGGCGGGCAGCGGCAACGCGTGTGGGTGGCGATGGTGCTG
GCGCAGCAGACCCCCTACCTGCTGCTGGACGAGCCGACCTCGTTCCTGGACCTGGCGCACCAGTACCGGTTGCTGGACCT
GCTGGCCCGGCTGCGCGACGAGGGCCGCACCGTCATCGCGGTCCTGCACGACATCAACCAGGCCTGCCGCTACGCCGACC
ACCTGATCGCCATGAAGGACGGACGCGTCGTCGCCGAGGGCCCCGCCAAGACCATCGTGGACGCCGAACTCGTCGACGAC
GTCTTCGACCTCCCCAGCGTCGTGGTCGACTGCCCGACCACCGGAGCCCCGATGGTGGTTCCCGAACCGGGACACCGGTA
A

Protein sequence : 
MNDNAHPVRLSARDLTLRYGDRVVATGLSLDIPDRAFTVIVGPNACGKSTLLRALVRLLRPAEGSVRLDEADLAAHPAKQ
LARTLGFLPQDPLSPDDIKVRQLVARGRYPHQSALSLWSRADEEAVAEAMATAGVADLSERLVTELSGGQRQRVWVAMVL
AQQTPYLLLDEPTSFLDLAHQYRLLDLLARLRDEGRTVIAVLHDINQACRYADHLIAMKDGRVVAEGPAKTIVDAELVDD
VFDLPSVVVDCPTTGAPMVVPEPGHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-51 51
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-51 51
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-51 51
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 6e-51 51
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-45 48
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-38 45
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 8e-43 44
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 8e-43 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-40 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snas_3783 YP_003512533.1 ABC transporter-like protein BAC0164 Protein 1e-38 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snas_3783 YP_003512533.1 ABC transporter-like protein VFG0925 Protein 2e-54 53
Snas_3783 YP_003512533.1 ABC transporter-like protein VFG1042 Protein 9e-39 45