Gene Information

Name : Snas_3513 (Snas_3513)
Accession : YP_003512269.1
Strain : Stackebrandtia nassauensis DSM 44728
Genome accession: NC_013947
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 3723932 - 3725557 bp
Length : 1626 bp
Strand : +
Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: ara:Arad_7675 peptide ABC transporter

DNA sequence :
ATGAACCAGCCAGTGTTGAGTATCCGCGACCTGTCGGTGGCCTTCCGCACCAACGGATCCGACGTCACCGCCGTCAACGG
TGTCAGCCTCGACGTACCGCAGGGCCACACCGTCGCCGTGGTCGGCGAGTCCGGCTCCGGAAAGTCCACGACGGCCGCCG
CCGTCAACCGGCTGCTGCCCGCCAACGGGCGCATCACCTCCGGCCAGGTCCTGTTCAAGGGCGAGGACCTCGCCGACCTG
AGCGAACGCCGGATGAGGGCCATCCGGGGCGCCGGGATCGGGCTCGTCCCACAGGACCCCATGTCCAACCTCAACCCGCT
GCTGCGCGTCGGCGACCAGGTCGCCGAGGCGCTTGAGGTCCACGACCGCGCGCACGGCAGGACCGCCCACGCCCGCGCCG
TCGAACTGCTCGACAGCGTCGGCATCCCCGATGCGGAGCGGCGCGCTCGCCAGTACCCGCACGAGTTCTCCGGCGGTATG
CGGCAGCGCGTCCTCATCGCCATGGGGCTGGCCTGCGAACCCAGCCTGCTGATCGCCGACGAACCGACCTCCGCCCTGGA
CGTCACGCTCCAGCGCCGCATCCTCGACCAGCTGGACACCCTCACCACGAACCTGGGCACCAGCGTCCTGCTCATCACCC
ACGACCTGGCCCTGGCGGCCGAACGCGCCGACACCGTCGCCGTCATGTACCACGGCGAGATCGTGGAATCCGGTGGCGCG
CAGGACATCCTGGCCGACCCGCAACACGAGTACACCCGCAGGCTGCTGGCCGCCGCACCCAGCCTCACCTCCGCGACCAC
CGTCGCCGGGCCCCTGGAACCCGAAGCCCGTCCCGACGCCACCGATCTCATCACCGTGGACAAGCTCACCAAACGGTTCC
CGATCCGGGCCTCGGGCTCTAGCTCCGAGTTCACCGCCGTCGACGAGGTCGGCTTCACCATCCCGCGCGGCCACACCGTG
TCCATCGTGGGGGAATCGGGCTCCGGCAAGTCCACCACCGCCAACCTGATTCTCGGACTGGAGAAGCCGAGCTCCGGCAG
CATCGCCTTCGAAGGCGCCGACATCACCACGATGAACCAGAAGGAGACGTTCGCGCTGCGCCGCCGCGTCCAGCCGGTGT
TCCAGAACCCTTACGCGTCACTCGATCCCCGATACACCGTCGAACAGTCCATCGCCGAGCCGCTGCGGGTTCACCGCGTC
GGCGACAAGAAATCGCGCCACGACACCGTTGTCAAGCTCCTCGACCAGGTGGCGTTGCCGTCCACGATGGCCGAACGGCT
CCCCCACGAACTGTCCGGCGGCCAGCGCCAGCGGGTGGCGATCGCCCGCGCCATCGCGCTGTCGCCCGACCTCGTCGTCC
TCGACGAGGCGGTGTCGGCGCTGGACGTGCTCGTGCAGGCCCAGATCCTGGAGCTGCTGTCCGAACTGCAACGCGAACTG
GGGCTCAGTTACCTGTTCATCAGCCACGACCTGGCGGTGGTGCGGCTGATCTCCCACGCCGTGCACGTCATGCGCGACGG
CAGGATCGTCGAAAGCGGGACACCGCAGGCGATCTTCGCCAACCCGCAGGACGACTACACCCGCGAACTGCTCGCCGCCA
TCCCCGGAGCGGGCCTGGCCACGTAG

Protein sequence :
MNQPVLSIRDLSVAFRTNGSDVTAVNGVSLDVPQGHTVAVVGESGSGKSTTAAAVNRLLPANGRITSGQVLFKGEDLADL
SERRMRAIRGAGIGLVPQDPMSNLNPLLRVGDQVAEALEVHDRAHGRTAHARAVELLDSVGIPDAERRARQYPHEFSGGM
RQRVLIAMGLACEPSLLIADEPTSALDVTLQRRILDQLDTLTTNLGTSVLLITHDLALAAERADTVAVMYHGEIVESGGA
QDILADPQHEYTRRLLAAAPSLTSATTVAGPLEPEARPDATDLITVDKLTKRFPIRASGSSSEFTAVDEVGFTIPRGHTV
SIVGESGSGKSTTANLILGLEKPSSGSIAFEGADITTMNQKETFALRRRVQPVFQNPYASLDPRYTVEQSIAEPLRVHRV
GDKKSRHDTVVKLLDQVALPSTMAERLPHELSGGQRQRVAIARAIALSPDLVVLDEAVSALDVLVQAQILELLSELQREL
GLSYLFISHDLAVVRLISHAVHVMRDGRIVESGTPQAIFANPQDDYTRELLAAIPGAGLAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-136 55
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-72 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-72 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 1e-72 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-72 41