Gene Information

Name : Snas_2818 (Snas_2818)
Accession : YP_003511587.1
Strain : Stackebrandtia nassauensis DSM 44728
Genome accession: NC_013947
Putative virulence/resistance : Virulence
Product : transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 2964099 - 2965133 bp
Length : 1035 bp
Strand : -
Note : PFAM: transport system permease protein; KEGG: atc:AGR_pAT_449 ferric enterobactin transport protein FepD

DNA sequence :
ATGACGAGCACCCGACTCGCCGAACGCACCAAACCGGCCCGGGCTCCGCGACGGGGTCTGGGCTTGGCGCTGGCCGTGCT
CGCGCTGGCGGGCGCGTGCGTGCTGAGCCTGGGAGTCGGCGCCAAGGCGATCCCAGCCTCCGACGTCATCGCGGCGATCC
TCGATCCCGACAACGGCGCCGAGGCCCCGATCGTGTGGAGCCTGCGGATTCCGCGCACCCTCATGGGGCTGACCGCCGGT
GCCGCGCTGGGTGCCTGCGGCGCGCTGATCCAGGCGCTGACCCGCAACCCGCTGGCCGACCCGGGCATCCTCGGCGTCAA
CGCGGGCGCGGCGTTCGCGATCACCATGGCCATCGCGTTCCTCGGCCTGTCCTCGCCGTGGGGATATGTGTGGTTCGCGA
TCGCCGGTGCCTTCGTCGCGACGCTGGCGGTGTACGCGATCGGCTCGATCGGACGGGCCGCCGCGACGCCGGTGCGGATG
ACGCTGGCCGGGGTGGCGATGTCGGCGGTGCTGGCCGGGGTCACCCAGATCGTGTCGCTGACCAACCCGCGGCTGTTCCA
CAGTTCGCTGAGCTGGACGGTGGGCAGCCTCGGCGGCCGCGATCTCGGCATCATCGCCGCTCTGGCCCCGCTCGTCGGTA
TCGGCCTGGTGCTGGCGGTGCTGGTCACCAAGCCGCTCAACGCCTGGGCGCTGGGTGACGACCTGGGCCGGTCGCTGGGC
GGCAACCCCAACCGGGTCCGCGTCATCACCATCACCGCGATCACGGTGCTGGCCGCCGCGGCCACCGCGCTGGCCGGTCC
GATCGGCTTCGTCGGACTGATCGTCCCGCACGTGGTGCGATGGTTCACCGGCCCGGACCAACGCTGGATCGTCGCGCTGT
CGGTGGTGGTGGCGCCGGTGCTGTTGTTGGTCGCCGACTCGCTGGGCCGGATTCTGCTGCCCAACGGCGAACTGCGCGTG
TCCATTGTGACGGCGTTTCTGGGGGCGCCACTGATGATGGGTCTCGTGATGCGCAGGAAGGCCAGTTCACTGTGA

Protein sequence :
MTSTRLAERTKPARAPRRGLGLALAVLALAGACVLSLGVGAKAIPASDVIAAILDPDNGAEAPIVWSLRIPRTLMGLTAG
AALGACGALIQALTRNPLADPGILGVNAGAAFAITMAIAFLGLSSPWGYVWFAIAGAFVATLAVYAIGSIGRAAATPVRM
TLAGVAMSAVLAGVTQIVSLTNPRLFHSSLSWTVGSLGGRDLGIIAALAPLVGIGLVLAVLVTKPLNAWALGDDLGRSLG
GNPNRVRVITITAITVLAAAATALAGPIGFVGLIVPHVVRWFTGPDQRWIVALSVVVAPVLLLVADSLGRILLPNGELRV
SIVTAFLGAPLMMGLVMRRKASSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 2e-25 44
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 2e-25 44
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 2e-25 44
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 2e-25 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snas_2818 YP_003511587.1 transporter permease VFG0926 Protein 3e-29 48