Gene Information

Name : Snas_2816 (Snas_2816)
Accession : YP_003511585.1
Strain : Stackebrandtia nassauensis DSM 44728
Genome accession: NC_013947
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2962250 - 2963041 bp
Length : 792 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_pAT_452 probable iron-siderophore uptake system ATP-binding component

DNA sequence : 
ATGACACTGGAAAGTGGACTCAACGCGGAGCGGGTGTCGCTGGCGTATGGTGACCGCGTCGTCAGCCAGGACCTGTCCGT
CGCGATCCGGCCGGGTGCCTTCACCGCCATCATCGGCCCCAACGGCTGCGGCAAGTCGACCCTGCTGCGGGCGTTCGCCA
GGCTGCTCAATCCCAAGGCCGGACAGGTGGTGCTGGACGGCCGCGACATCGCCACCATGCGCAGCAAGGCCCTGGCCCGG
CAACTGGGACTGCTGCCACAGTCGGCCATCGCGCCCGACGGCATCCGGGTCGTCGACCTGGTGGCCCGGGGCCGCTATCC
GCACCAGGGCGCCTTCGACCGCTGGTCCGAACGCGACGAGGCGGCGGTGGCCACGGCGATGCGCGAAACCGGGGTCACCG
AGTTCTCCGGCAGGCTCGTCGACGAGCTGTCCGGCGGGCAACGACAGCGGGTGTGGATCGCGATGACGCTGGCCCAGGAG
ACCGCGACGCTGCTGTTGGACGAACCCACGACGTTCCTCGACATCGGACACCAGATCGACGTACTGAACCTGTTCGCCCG
CATCAACTCCTCGAGTGGGCGCACCATTGTGGCCGTGCTGCACGACCTCAACCACGCCGCCCGCTACGCCGATGTCGTGG
TGGCGATGCGCGACGGCGACATCGTCGCGCAGGGGCCACCGGCGGACGTGTTCACGCCCGGCATCGTGGAGAAGGTCTTC
GACTTGCCCTGCCGGGTGATCGAGGACCCCGTGGCGGGGACGCCGCTGGTGGTGCCGGTCGGCGACCGCTGA

Protein sequence : 
MTLESGLNAERVSLAYGDRVVSQDLSVAIRPGAFTAIIGPNGCGKSTLLRAFARLLNPKAGQVVLDGRDIATMRSKALAR
QLGLLPQSAIAPDGIRVVDLVARGRYPHQGAFDRWSERDEAAVATAMRETGVTEFSGRLVDELSGGQRQRVWIAMTLAQE
TATLLLDEPTTFLDIGHQIDVLNLFARINSSSGRTIVAVLHDLNHAARYADVVVAMRDGDIVAQGPPADVFTPGIVEKVF
DLPCRVIEDPVAGTPLVVPVGDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-60 51
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-64 49
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-64 49
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-64 49
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-64 49
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-53 48
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-56 47
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-56 47
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-56 47
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-56 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-54 46
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-60 42
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-60 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snas_2816 YP_003511585.1 ABC transporter-like protein BAC0164 Protein 2e-53 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snas_2816 YP_003511585.1 ABC transporter-like protein VFG0925 Protein 2e-73 58
Snas_2816 YP_003511585.1 ABC transporter-like protein VFG1042 Protein 2e-53 48