Gene Information

Name : Snas_2748 (Snas_2748)
Accession : YP_003511517.1
Strain : Stackebrandtia nassauensis DSM 44728
Genome accession: NC_013947
Putative virulence/resistance : Virulence
Product : transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 2892183 - 2893190 bp
Length : 1008 bp
Strand : -
Note : PFAM: transport system permease protein; KEGG: atc:AGR_pAT_449 ferric enterobactin transport protein FepD

DNA sequence :
GTGAAGGCTGTATCCACCACGGCGCGCGCCGTGCGGATCCTGCCGGTGGTCGCGGCCCTGGCGCTGGTGTGCCTGCTGAG
CATCGCGATGGGTTCCAAACCCTTGTCCCCCATCGCGATCCTCGACGCGCTGCTGGGTGACGCGCCCGCCGGGGACGCCT
ACATCGTGTGGCAACTGCGCGGCTCCCGCACCCTGCTGGGCCTGGCCGTCGGCGCCGCGCTGGGGGTGTCGGGGATGCTG
ATCCAGGCGCTGACTCGCAACCCGCTCGCCGACCCGGGCGTGCTGGGTGTGACGTCGGGGGCCGCGTTCGCCGTGGCCGT
GACGATCTCGCTGCTGGGCCTGACCAGCGTGTCCGACTACCGTTGGGCCGCACTGCTGGGCGCCCTGGCGGTCACGGTGC
TGGTCTACCTCATCGGCTCGTCCGGACGTGGACCGATCGACCCGGCGCGACTCACACTGGCCGGGGTCGCACTGGCGGCG
GTACTCCAGGGAGTGGTGTCGGCACTGCTGCTGCTCGACCCACGCGCCTTCGACATCATGCGCGGCTGGAACGCCGGAAC
CATCGCCAGCCGGGGTCTGGAGGTGCTGCTGCCGGTGCTGCCGCTGATCGGCCTGGGCATCCTCATCGCCGCGGCGGTGT
CACCGTCCCTCAACGCCGTGGCGATGGGCGACGACGTCGCGGTGGCGCTCGGCGTGCCGTTGCGGACGGTGCGGGTGCTG
GTCGTGGTCGCGGTGACACTGCTGGCGGGCGGCGCGACCGCCGCGGCCGGTCCGCTGCTGTTCATCGGGCTGATGGTGCC
GCACATCGCGCGGCTGCTGGTGGGCGCCGACCAGCGGTGGATCTTCGCGTACTCGCTGCTGCTGGGGCCGATCCTGCTGC
TGGCCTCCGATGTGGCCGGTCGGCTCATCATGATGCCGGGTGAGATCCCGGTCGGGATCCTGACGGCCTTCGTCGGCGCC
CCGGTGCTGATCGTGCTGATCCGACGGCGTCGGGAGGTGGCGGCGTGA

Protein sequence :
MKAVSTTARAVRILPVVAALALVCLLSIAMGSKPLSPIAILDALLGDAPAGDAYIVWQLRGSRTLLGLAVGAALGVSGML
IQALTRNPLADPGVLGVTSGAAFAVAVTISLLGLTSVSDYRWAALLGALAVTVLVYLIGSSGRGPIDPARLTLAGVALAA
VLQGVVSALLLLDPRAFDIMRGWNAGTIASRGLEVLLPVLPLIGLGILIAAAVSPSLNAVAMGDDVAVALGVPLRTVRVL
VVVAVTLLAGGATAAAGPLLFIGLMVPHIARLLVGADQRWIFAYSLLLGPILLLASDVAGRLIMMPGEIPVGILTAFVGA
PVLIVLIRRRREVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 4e-15 46
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 4e-15 46
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 4e-15 46
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 4e-15 46
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 2e-11 42
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 2e-11 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snas_2748 YP_003511517.1 transporter permease VFG0926 Protein 2e-15 47