Gene Information

Name : Snas_2746 (Snas_2746)
Accession : YP_003511515.1
Strain : Stackebrandtia nassauensis DSM 44728
Genome accession: NC_013947
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2890328 - 2891128 bp
Length : 801 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE3621 iron-siderophore transport system, ATP-binding component

DNA sequence :
GTGAGCGAGACCAAGATGGACGGCGCCCGGCTGCGGGCGGTGGACGTGACCGTCGGCTACGACGGCAAGATCGTGTCGCG
TGACCTGAGCATGTCCGTCCCCGACGGGGGCTTCACGGTCATCGTGGGCCCCAACGCGTGCGGGAAGTCCACTTTGCTGC
GGGCGTTGGCGCGGCTGCTGCGTCCGAAGTCGGGCGAGGTGGTGCTGGACGGGAGGGCCATCACGCAGTACGGCTCCCGC
GAGGTCGCCCGGCGGCTGGGGCTGCTGCCGCAGTCCTCGGCGATCCCGGAATCCATCACCGTCGCCGACCTGGTGGCGCG
GGGCCGCTACCCGCACCAGGGGCTGCTGCGGCAGTGGACCCCGGCCGACGAGGCGGCGGTACGGGAAGCCTTGGCGGCCA
CCAGTTTGACGGAACTGGGTGCCTGGCAGGTGGACCGGCTTTCGGGCGGGCAGCAGCAGCGGGCCTGGGTGGCGATGGTG
CTGGCGCAGCGGACCGAACTGGTGCTGCTGGACGAACCGACGACGTATCTCGACATCGCGCACCAGGTGGAACTGCTGGA
CCTGTTCAACCGCTTGCACCAGCGGGGACACACCATCGTGGCGGTGCTGCACGACCTCAACCAGGCCGCGCGCTACGCGA
CCCACCTGGTGGCGATGCGCGACGGCGCGATCGTCGCGCAGGGGCCGCCGTCCGAAGTGGTGTCGGCGGAGCTGGTGGAG
GAGGTGTTCGGGCTGCCGTGCGTCGTGGTTCCCGACCCGGTCACCGGGACCCCGGCGGTGTTCCCCAGGTCGCGGCCCTG
A

Protein sequence :
MSETKMDGARLRAVDVTVGYDGKIVSRDLSMSVPDGGFTVIVGPNACGKSTLLRALARLLRPKSGEVVLDGRAITQYGSR
EVARRLGLLPQSSAIPESITVADLVARGRYPHQGLLRQWTPADEAAVREALAATSLTELGAWQVDRLSGGQQQRAWVAMV
LAQRTELVLLDEPTTYLDIAHQVELLDLFNRLHQRGHTIVAVLHDLNQAARYATHLVAMRDGAIVAQGPPSEVVSAELVE
EVFGLPCVVVPDPVTGTPAVFPRSRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-49 52
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-49 52
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-49 52
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-49 52
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-43 50
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-53 50
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-46 47
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-47 43
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-47 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-44 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-44 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-44 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-44 43
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 3e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snas_2746 YP_003511515.1 ABC transporter-like protein BAC0164 Protein 8e-44 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snas_2746 YP_003511515.1 ABC transporter-like protein VFG0925 Protein 2e-60 58
Snas_2746 YP_003511515.1 ABC transporter-like protein VFG1042 Protein 7e-44 50