Gene Information

Name : Snas_2643 (Snas_2643)
Accession : YP_003511413.1
Strain : Stackebrandtia nassauensis DSM 44728
Genome accession: NC_013947
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2778815 - 2779552 bp
Length : 738 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cak:Caul_1277 ABC transporter related

DNA sequence :
ATGGACACAATCGGGCGCACGGACACCGAGGTGGTGCGCGTCGAAGCCGTTACCAAGGACTACGGCACGGTGAAGGCACT
GCGAGGCGTCGACCTCGACCTGCCCGGCGGCGGCTTCACCGCCGTGATGGGGCCCTCGGGCTCGGGCAAGAGCACACTGT
TGCACTGCGCCGCCGGACTCGACCGGCCCAGCTCCGGCTCGGTGTGGCTGGGCGCCACCGACCTGGCGACGCTGTCGGAG
ACGGCACTGACCGAGTTGCGCCGCACCAGGATCGGCTTCATCTTTCAGGCGTACAACCTCATCGGATCGCTGACCGTCGA
ACAGAACATCACGCTGCCGCTGCGGCTGGCCGGGGCCCGCGCCGACCCGGACTGGCTGGCCGAGATCGTGACGCAGGTGG
GGCTGGACCAGCGCCTGACGCATCGTCCGGCGCGACTGTCCGGCGGCCAACAGCAGCAGGTCGCCATCGCGCGGGCCCTG
ATCACCCGACCCGCCGTCGTCTTCGCCGACGAACCGACCGGCGCACTCGACACCCGCACCGGCCAGCAGGTGCTGGAACT
GTTGCGGCGCATGGTCGACACCTTCGGGCAGCGGGTACTGATGGTGACCCACGACCCGGTGGCCGCCTCCTGGGCCGACC
GGGTGGTGTTCCTCGCCGACGGGAAACTCGCCGGGGAACTGCGCCGGCCCGATCCCGAACAGGTGGCCGCGCGGCTGACC
ACGTTGGGGGAGTGGTGA

Protein sequence :
MDTIGRTDTEVVRVEAVTKDYGTVKALRGVDLDLPGGGFTAVMGPSGSGKSTLLHCAAGLDRPSSGSVWLGATDLATLSE
TALTELRRTRIGFIFQAYNLIGSLTVEQNITLPLRLAGARADPDWLAEIVTQVGLDQRLTHRPARLSGGQQQQVAIARAL
ITRPAVVFADEPTGALDTRTGQQVLELLRRMVDTFGQRVLMVTHDPVAASWADRVVFLADGKLAGELRRPDPEQVAARLT
TLGEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-37 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-37 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-37 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snas_2643 YP_003511413.1 ABC transporter-like protein CP001581.1.gene598.p Protein 6e-41 47
Snas_2643 YP_003511413.1 ABC transporter-like protein NC_008702.1.4606598. Protein 8e-35 47
Snas_2643 YP_003511413.1 ABC transporter-like protein CP001581.1.gene798.p Protein 1e-37 45
Snas_2643 YP_003511413.1 ABC transporter-like protein NC_012469.1.7686878. Protein 3e-34 41