Gene Information

Name : Snas_2422 (Snas_2422)
Accession : YP_003511198.1
Strain : Stackebrandtia nassauensis DSM 44728
Genome accession: NC_013947
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 2568800 - 2570887 bp
Length : 2088 bp
Strand : -
Note : TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: dal:Dalk_2752 transketolase

DNA sequence :
GTGGCTAAGTCCCTGGAGTGGACAGACCTGGATCGACGTGCGGTGGATACGGCCCGGGTACTGGCCGTGGACGCGGTGGA
GAAGGCCGGAAACGGTCACCCGGGGACGGCGATGAGCCTGGCCCCGGCCGCGTACCTGTTGTTCCAGCGGGTGATGCGTC
ACGACCCCTCCGAGCCGGCCTGGGCCGGACGGGACCGGTTCGTCCTTTCGTGTGGACATTCGAGCCTTACGCTCTACATC
CAGCTGTACCTCGCCGGTTTCGGCCTGGAGCTGGACGATCTGAAGTCGTTGCGGCAGTGGGGTTCGCGCACGCCCGGTCA
CCCTGAGTTCGGGCACACCGCCGGTGTGGAGACCACCACCGGTCCGCTGGGCCAGGGCATCGCCACCGCCGTGGGCATGG
CGATGGCCGCGCGCCGCGAGCGCGGGCTGTTCGACCCCGAGGCCGCGCCGGGCACCTCCCCCTTCGACCACCACGTGTAC
GTGGTCTGCTCGGACGGCGACATCGAGGAGGGCATCAGCCACGAGGCCAGCGCGCTGGCCGGGGTGCAGGACCTGGGCAA
CCTGATCGTCCTGTACGACGACAACCAGATCTCCATTGAGGACGACACGAACATCGCGTTGTCGGAGGACGTCAACGAGC
GCTACGCCGCCTACGGCTGGCACACCCAGACCGTGGACTGGCGGCCCGGCGGCAAGCACGCCGAGGACGTCGACGCCCTG
TACCAGGCCATCGAGAAGGCCAAGCGGGTCACCGACAAGCCGTCGTTCATCTCGCTGAAGACCATCATCGGCTGGCCCGC
CCCCAACAAGCAGAACACCGGCGGCATCCACGGCTCCAAGCTGGGCACCGACGAGGCCGCCGAGACCAAACGCATCCTGG
GCTTCGACCCGGAGCAGTCCTTCGAGGTCACCGACGAGGTCATCGGGCACACCCGCGGCGCCGTCGACCGGGGCCGCGCC
GAGCGCGAGCGCTGGCAGTCGGACTTCGACGCCTGGGCGCAGGCCAACCCGAAGCGCGCCGAACTGTACGAACGCGTGTC
GCGTCGTCAGCTGCCGCCGGAGTGGGAGAAGTCGCTGCCGGTGTTCGAGCCCGACGCCAAGGGCGTGGCCACCCGCGCCG
CGTCCGGGAAGGTGCTGTCGGCGCTGGCCGACACGCTGCCGGAGCTGTGGGGCGGTTCGGCCGACCTCGCGGGCAGCAAC
AACACCACGATGGACGGTGAGCCGTCGTTCCTGCCCGAGGCCCGGGCGACCAAGAAGTTCCCCGGCAACCCGTACGGGCG
CACGCTCCACTTCGGTATCCGCGAGCACGCCATGGGCGCGATCTGCAACGGCATCGCGCTGCACGGCGGCACCCGCCCCT
ACGGCGGCACCTTCCTGGTGTTCAGCGACTACATGCGGCCAGCCGTACGGCTGGCGGCGCTGATGCAGCTGCCGGTGGTG
TTCGTGTGGACGCACGACTCGATCGGGCTTGGCGAGGACGGTCCGACCCACCAGCCCATCGAGCACCTGGCGGCGCTGCG
CGCGATGCCGGGCCTGGACGTGGTGCGTCCGGCCGACGCCAACGAGACCGCGTGGGCGTGGCGGCAGGCGCTGGAGCACA
CCGACCGGCCCACCGGCCTGGCGCTGACCCGGCAGAACGTCCCCACCTGGGACCGCACCGAGTTCGGCAGCGCCGAGGGC
ACGGTGCGCGGCGGCTACGTGCTGGCCGAGGCCGACGGCGGCAAGCCGCAGGTGATCCTCGTGGGCACCGGCAGCGAGGT
GCAGCTGGCGGTTCAGGCGCGCGAGACGCTGCAGGCCCAGGGCATCCCCACCCGCGTGGTGTCGATGCCGTGCCTGGAGT
GGTTCGACGCCCAGGAGCAGTCCTACCGCGACAGCGTGCTGCCGCCCAACGTCAAGGCCCGCGTCAGCGTCGAGGCCGGG
ATCGCCATGCCGTGGCGGCACCTGGTCGGCGACGACGGCGCGAGCGTCAGCATCGAGCACTTCGGCGCGAGCGCGCCCTA
CGAGCGCATCTACGAGGAATTCGGCGTCACCGCCGAGGCCGTCGTCACCGCGGCGAAGCGCAGCCTCGACAACGTCAACA
ACCACTAA

Protein sequence :
MAKSLEWTDLDRRAVDTARVLAVDAVEKAGNGHPGTAMSLAPAAYLLFQRVMRHDPSEPAWAGRDRFVLSCGHSSLTLYI
QLYLAGFGLELDDLKSLRQWGSRTPGHPEFGHTAGVETTTGPLGQGIATAVGMAMAARRERGLFDPEAAPGTSPFDHHVY
VVCSDGDIEEGISHEASALAGVQDLGNLIVLYDDNQISIEDDTNIALSEDVNERYAAYGWHTQTVDWRPGGKHAEDVDAL
YQAIEKAKRVTDKPSFISLKTIIGWPAPNKQNTGGIHGSKLGTDEAAETKRILGFDPEQSFEVTDEVIGHTRGAVDRGRA
ERERWQSDFDAWAQANPKRAELYERVSRRQLPPEWEKSLPVFEPDAKGVATRAASGKVLSALADTLPELWGGSADLAGSN
NTTMDGEPSFLPEARATKKFPGNPYGRTLHFGIREHAMGAICNGIALHGGTRPYGGTFLVFSDYMRPAVRLAALMQLPVV
FVWTHDSIGLGEDGPTHQPIEHLAALRAMPGLDVVRPADANETAWAWRQALEHTDRPTGLALTRQNVPTWDRTEFGSAEG
TVRGGYVLAEADGGKPQVILVGTGSEVQLAVQARETLQAQGIPTRVVSMPCLEWFDAQEQSYRDSVLPPNVKARVSVEAG
IAMPWRHLVGDDGASVSIEHFGASAPYERIYEEFGVTAEAVVTAAKRSLDNVNNH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 1e-123 45
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 3e-124 45