Gene Information

Name : Snas_2247 (Snas_2247)
Accession : YP_003511030.1
Strain : Stackebrandtia nassauensis DSM 44728
Genome accession: NC_013947
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2383158 - 2383901 bp
Length : 744 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU1162 ABC transporter, ATP-binding protein

DNA sequence :
ATGAACACGCAGACCAGCGTCCGCGCCGCCACGGCGGTCCGGCTGACCGAAGTGACCAAGAAGTACCGGGGCGGCGTGAC
CGCACTGGACCACGTCAGCCTGCCGGTGCCGCGCGGCACCTTCCTGGCGGTCATGGGGCCCTCGGGTTCCGGCAAGAGCA
CCCTGCTGCACTGCGCGGCGGGACTGGACGTTCCCACCGACGGATCCGTCCACATCGGTGACACCGAGATCTCGGGGCTG
TCGGAGACGAAACGCACCATGCTGCGGCGCGAACGCGTCGGCTTCGTGTTCCAGGCGTACAACCTGGTGCCCTCGTTGAG
CGTCTCCGACAACATCACGCTGCCACTACGACTGGCCGGGGCGCGCCCCGATCACGACTGGCTGCGGACCCTGGTCGCCC
ACATCGGACTGGAGGGGCTGTTGAACCGTCGTCCCGCCGAACTGTCCGGCGGCCAGCAGCAGCGCGCCGCCGTGGCGCGG
GCCCTGGTGGCCCGGCCCGACGTGGTGTTCGCCGACGAACCCACCGGCGCGCTCGACCTGCACACCGCCGGTGAGGTGCT
GGACCTGCTGCGGCGCTTGGCCGACGACTTCGGCCAGACCGTCGTCATGGTCACCCACGACCCGGGGGCGGCGGCTCGCG
CCCACGAGGCGGTCGTCATGGCCGACGGCCGGATCCGCGACGTGGTGGCGACGCCGTCGGCCGAGAAGCTGGCGCAGCTG
CTGACCACACTGGAACGGCGGTGA

Protein sequence :
MNTQTSVRAATAVRLTEVTKKYRGGVTALDHVSLPVPRGTFLAVMGPSGSGKSTLLHCAAGLDVPTDGSVHIGDTEISGL
SETKRTMLRRERVGFVFQAYNLVPSLSVSDNITLPLRLAGARPDHDWLRTLVAHIGLEGLLNRRPAELSGGQQQRAAVAR
ALVARPDVVFADEPTGALDLHTAGEVLDLLRRLADDFGQTVVMVTHDPGAAARAHEAVVMADGRIRDVVATPSAEKLAQL
LTTLERR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-31 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-31 47
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-31 47
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-31 47
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-25 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snas_2247 YP_003511030.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-36 47
Snas_2247 YP_003511030.1 ABC transporter-like protein NC_008702.1.4606598. Protein 8e-29 44
Snas_2247 YP_003511030.1 ABC transporter-like protein CP001581.1.gene798.p Protein 1e-32 43
Snas_2247 YP_003511030.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-29 41