Gene Information

Name : Snas_1903 (Snas_1903)
Accession : YP_003510692.1
Strain : Stackebrandtia nassauensis DSM 44728
Genome accession: NC_013947
Putative virulence/resistance : Virulence
Product : LuxR family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2019709 - 2020386 bp
Length : 678 bp
Strand : +
Note : PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; SMART: response regulator receiver; regulatory protein LuxR; KEGG: scl:sce5431 two-component system response regulator

DNA sequence : 
ATGAGCCAACCCATCCGCGTCCTGGTCGCCGACGACCACCTCGTGGTGCGCACCGGCTTCGCCGAACTGCTTGGCACCCA
ACCGGACTTCAGCGTCGTCGGCATCGCCTCCGACGGCGCCGAGGCCGTGATGGCCTGCCGCACCGCCACCCCCGACGTCG
TCCTCATGGACGTCCGGATGCCCAACATGGACGGCATCGAGGCCACCCGCCGCATCGCCGCCACCTCCGAGGCGACGCCG
CGCGTCATCATCCTGACCACTTTCGACCTGGACGAGTACGTCTACGACGCGCTGCGAGCCGGGGCCAGCGGCTTCCTGCT
CAAGGACGTCACCGCCGAGCGGCTGTTCGACGCCGTACGGGTCGTGGCGGCGGGGGAGGCGCTGCTGGCGCCCACCGTCA
CCCGCCGCCTCATCGGCGAGTTCGTCCAGTCCAAGCAGCCGCGCCCGGTCGCCGACGCGAGGCTGGCGTCGCTGACGCCG
CGCGAGACCGAGGTGCTGCGGCTGGTCGCCGAAGGACTGTCCAATCCGGAACTGGCCGCCCGGCTGACCGTCTCGGAGGA
GACGGTTAAGACCCACGTCAGCCGGGTACTGCACAAACTCGGGCTGCGCGACCGCACCCAGGCGGTGGTGGCCGCCTACG
AATCCGGCCTCGTCGTCCCCGGCGGCCGTCCGGCCTAG

Protein sequence : 
MSQPIRVLVADDHLVVRTGFAELLGTQPDFSVVGIASDGAEAVMACRTATPDVVLMDVRMPNMDGIEATRRIAATSEATP
RVIILTTFDLDEYVYDALRAGASGFLLKDVTAERLFDAVRVVAAGEALLAPTVTRRLIGEFVQSKQPRPVADARLASLTP
RETEVLRLVAEGLSNPELAARLTVSEETVKTHVSRVLHKLGLRDRTQAVVAAYESGLVVPGGRPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
regB YP_001220830.1 putative two-component system response regulator Not tested chp/tomA region Protein 5e-30 42
DIP0091 NP_938488.1 two-component system response regulator Not tested Not named Protein 9e-32 41
CD241_0088 YP_005124357.1 two-component system response regulator Not tested Not named Protein 3e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snas_1903 YP_003510692.1 LuxR family two component transcriptional regulator VFG1824 Protein 3e-27 41