Gene Information

Name : Snas_1885 (Snas_1885)
Accession : YP_003510674.1
Strain : Stackebrandtia nassauensis DSM 44728
Genome accession: NC_013947
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1977554 - 1978297 bp
Length : 744 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pla:Plav_1100 ABC transporter related

DNA sequence :
ATGACGAATGAGACCGCCGCGGTCACCGCGGCCCGACTGACCAAGACCTTCGACTCCGGCGACACCCTGGTGCGGGCGCT
CGACGGCGTCAGCGTGGAATTCCGGCCCCGGCGTTTCAGCGCCATCATGGGGCCGTCGGGTTCGGGCAAGTCCACGCTGA
TGCACTGCCTGGCCGGACTCGACCGGCCCGGCGACGGCGAGGTGATGCTCGGCGGGACATCACTGTGGACGCTCGACGAC
GACGCCCTGACCGAGGTGCGGCGGGACCGCATCGGCTTCATCTTCCAGGGCTTCAACCTGCTGCCCACCCTCACCGCCTA
CGAGAACATCACGCTTCCGTTCGTGCTGGCGGGAAAGCGCGGCGATCCGGACATCGTGGACGCCGTCGTCGACGCGCTCG
GACTGGGCGAGCGGCTGCACCACCGTCCCAGCCAGCTGTCGGGCGGCCAGCAGCAGCGGGTCGCGTGCGCCAGGGCGCTG
GTGACCGAACCGGACGTGGTGTTCGCCGACGAACCCACCGGCGCGCTGGACTCGCGGTCCTCGCGGGAACTGCTGGCCTT
CCTGCGCCACGGCGTGGACGCGCTGGGGCGCACCGTCGTCATGGTCACCCACGACCCGGTCGCGGCCGGGTACGCCGACG
AGGTGCTGTTCCTGGCCGACGGCCGCATCGTGGACACGATGAGCGACCCGACCGCCGAGACGGTGCTCGACCACATGAAG
GCGCTCGAGGAGGTGGCGGTCTGA

Protein sequence :
MTNETAAVTAARLTKTFDSGDTLVRALDGVSVEFRPRRFSAIMGPSGSGKSTLMHCLAGLDRPGDGEVMLGGTSLWTLDD
DALTEVRRDRIGFIFQGFNLLPTLTAYENITLPFVLAGKRGDPDIVDAVVDALGLGERLHHRPSQLSGGQQQRVACARAL
VTEPDVVFADEPTGALDSRSSRELLAFLRHGVDALGRTVVMVTHDPVAAGYADEVLFLADGRIVDTMSDPTAETVLDHMK
ALEEVAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-34 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-36 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snas_1885 YP_003510674.1 ABC transporter-like protein CP001581.1.gene798.p Protein 4e-38 45
Snas_1885 YP_003510674.1 ABC transporter-like protein NC_008702.1.4606598. Protein 5e-36 44
Snas_1885 YP_003510674.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-38 44
Snas_1885 YP_003510674.1 ABC transporter-like protein CP001581.1.gene598.p Protein 4e-45 42