Gene Information

Name : Snas_1738 (Snas_1738)
Accession : YP_003510529.1
Strain : Stackebrandtia nassauensis DSM 44728
Genome accession: NC_013947
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 1824678 - 1825589 bp
Length : 912 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: scl:sce5790 putative ABC transporter, ATP- binding protein

DNA sequence :
ATGATCGACATTCGCGGGCTCGTCAAGCGTTACCGGGCCACGACCGCCGTCGACGACCTGTCGTTCACGGTCGAACCCGG
CTCCGTCACCGGTTTTCTCGGCCCCAACGGCGCCGGGAAGACCACCACCATGCGCATCCTGCTCGGCCTGGCCGCCGCCA
CCGAGGGCGAAGCCCTCGTCAAGGGCGAGCGGTACCCGCGGTTGTCCGAACCGACCCGCTCGGTCGGCGCGCTGCTGGAC
GCCGGTGACGTCCACCCTGGACGCAGCGCCCTGTCGCACCTGCGTGCCATCGCCTACGCCAACCGCATCGGCGACGAGCG
GGTCTCGGCCGTCCTGGAGCAGGTGGGCCTGGCCGGGGTGGCCCGCAAACGGGTCGGCAAGTTCTCGCTGGGCATGAAGC
AGCGGCTCGGCATCGCCGCGGCGCTGTTGGGTGACCCGGACGTGTTGATCCTGGACGAACCGGTCAACGGGCTCGACCCT
GACGGGGTGCGGTGGATCCGGGAGCTGACCCGGGGTCTGGCCGACGAGGGCCGCACCATCCTGATCTCCAGCCACCTGAT
GAGCGAGATGGAACTGACCGCCGACCGGCTGATCATCATCGCGCGCGGCAAACTGATCGCCGACACCTCGGTATCCGAAC
TGGCCGAACGGTTCCAGCGGGGCATCTCGGTGCGTTCCCCGCGCGCTGACGAGCTGGCCCAGGTGCTGGAGGCCGAGGGC
GCCGCCGTCGCCCGCGAGGCCGACGCACTGCTGGTCAACGGCCTCGACGTCGCCGCGATCGGCGACCTGGCCGCCGGCAA
GGGCATCGCCCTGCACGAGGTGGCACCGCGCCGCACCACGCTCGAGGACGCCTATATGGCACTGACCAGCGACTCCCTGC
AATTCGCCGCCCGCCCCGGAAGGAACCCCTGA

Protein sequence :
MIDIRGLVKRYRATTAVDDLSFTVEPGSVTGFLGPNGAGKTTTMRILLGLAAATEGEALVKGERYPRLSEPTRSVGALLD
AGDVHPGRSALSHLRAIAYANRIGDERVSAVLEQVGLAGVARKRVGKFSLGMKQRLGIAAALLGDPDVLILDEPVNGLDP
DGVRWIRELTRGLADEGRTILISSHLMSEMELTADRLIIIARGKLIADTSVSELAERFQRGISVRSPRADELAQVLEAEG
AAVAREADALLVNGLDVAAIGDLAAGKGIALHEVAPRRTTLEDAYMALTSDSLQFAARPGRNP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 1e-40 47
Spaf_1095 YP_006309897.1 ABC multidrug transporter Not tested FWisland_1 Protein 3e-42 46
SSU05_0910 YP_001198276.1 transport ATP-binding protein Not tested 89K Protein 6e-39 44
SSU98_0915 YP_001200473.1 transport ATP-binding protein Not tested 89K Protein 6e-39 44