Gene Information

Name : Snas_1439 (Snas_1439)
Accession : YP_003510238.1
Strain : Stackebrandtia nassauensis DSM 44728
Genome accession: NC_013947
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 1525587 - 1527725 bp
Length : 2139 bp
Strand : -
Note : TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: scl:sce1353 potassium-transporting ATPase B chain

DNA sequence :
ATGTCAAACATGGCAACGGTCGCACCGAAGACCAGAAACGGCCTTCTCGACCCCAAACAGTGGATCAAGTCCGTTCCGGA
CGCGTTCCGCAAACTCAACCCGAAGACGCTGTGGCGCAACCCGGTGATGTTCATCGTGGAGATCGGCGCGCTCGGCACGA
CCCTGCTGGCGATCGTCGATCCGTCGACGTTCGCGTGGATCATCACCGTGTGGCTGTGGCTGACGGTCCTGTTCGCCAAC
GCCGCCGAGGCCATCGCCGAGGGACGCGGCAAGGCGCAGGCCGACAGCCTGCGCAAGGCCAAGACCGACACCATCGCGCA
CCGACTGGTCACACAGGACGCCGAGATCGCCTCCCCCGACGTCGACACGACCGAGCTGGCCGCGCCGCGGCTGGTGCGTG
GTGACCTCGTGCTGGTCAAGGCCGGACAGGTCATCCCCGGCGACGGCGACGTCGTCACCGGTATCGCCAGTGTGGACGAA
TCCGCCATCACCGGCGAGTCGGCGCCGGTGATCCGGGAGTCCGGCGGTGACCGCTGCGCGGTCATGGGCGGCACCAAGGT
GCTCAGTGACTGGATCGTCGTGCGGATCACCGCCGAGCCCGGCAAGAGCTTCCTGGACCGCATGATCGCGCTGGTCGAGG
GCTCCGAACGCCGCAAGACCCCCAACGAGATCGCGCTGAACATCCTGCTGGCGGCGATGACGATCATCTTCCTGATGGCC
GTGGTCACCATGCAGCCGGTGGCGATCTACTCCAAGGACTACATGGCCGCCGCCCCCGACTCCGCCGTCATCGACGGCAA
CGGGGTCACCGGCATCGTCATGGTGTCGCTTTTGGTGTGTCTCATCCCGACGACGATCGGGGCGCTGCTGAGCGCCATCG
GCATCGCGGGCATGGACCGGCTGATCCAGCGCAACGTCATGGCCATGTCCGGGCGCGCCGTCGAGGCCGCCGGGGACGTC
AACACGCTGCTGCTGGACAAGACCGGCACCATCACGTACGGGAACCGGCGCGCCGGGGCCTTCCTGCCGGTGCCGGGCAT
CGGCGGCAACCACCTCGCCGACGCCGCGCAACTGTCCAGTCTGGCCGACGAGACCCCGGAGGGACGCTCCATCGTGGTCT
TCGCCAAGGAGGCGTACGGGCTGCGGGAACGCGACGCCGGGGAACTGTCCCACGCGACCTGGGTGGAGTTCACCGCCCAG
ACCCGGATGAGCGGCGTCGACCTCGACGAGGACGGCGGCACCCACCACATCCGAAAAGGCGCCGCGGCGGCCGTCCTGGA
CTGGGTCAAGGACAACGGCGGCACGCCCGGCAACGCCTCCGAACTGGTCGACCAGATCAGCCAGGAGGGCGGCACGCCGC
TGCTGGTGGCCGAGCGCAAGCCGGGCCGCCAGGCGCGGGTGCTGGGGGTCATCCACCTCAAGGACGTCGTCAAGGAGGGC
ATGGTCGAACGGTTCGCGAAGCTGCGCCAGATGGGCATCCGCACCGTCATGGTCACCGGCGACAACCCGTTGACGGCCAA
GGCGATCGCCGCCGAGGCCGGGGTCGACGACTTCCTGGCCGAGGCCCGGCCCGAGGACAAGATGGCGCTGATCAGGAAGG
AGCAGGACGGCGGACGGCTGGTCGCCATGACCGGGGACGGCACCAACGACGCCCCGGCGCTGGCCCAGGCCGACGTGGGT
GTCGCCATGAACACCGGCACCTCGGCGGCCAAAGAAGCCGGGAACATGGTCGACCTCGACTCCGACCCGACCAAGCTCAT
CGAGATCGTGGCCATCGGCAAGCAACTGCTGATGACCCGGGGCGCGTTGACGACCTTCTCGATCGCCAACGACATCGCCA
AGTACTTCGCCATCATCCCGGCGATCTTCGCGGCGGTGTACCCGAGCCTGGACGCGCTCAACGTGATGCGGCTGTCCAGT
CCGGAGTCGGCGATCATCTCGGCGGTGATCTTCAACGCGATCATCATCGTGGCACTGGTTCCGTTGGCGCTCAAGGGCGT
CAAGTACAAGCCGGGCGGCGCTTCGGCGATGCTGCGGCGCAACCTGTTCGTCTATGGACCCGGCGGCATCGTCGCCCCGT
TCATCGGCATCAAACTCATCGACATCATCATCTCGTTCATTCCGGGGATCGCGTCATGA

Protein sequence :
MSNMATVAPKTRNGLLDPKQWIKSVPDAFRKLNPKTLWRNPVMFIVEIGALGTTLLAIVDPSTFAWIITVWLWLTVLFAN
AAEAIAEGRGKAQADSLRKAKTDTIAHRLVTQDAEIASPDVDTTELAAPRLVRGDLVLVKAGQVIPGDGDVVTGIASVDE
SAITGESAPVIRESGGDRCAVMGGTKVLSDWIVVRITAEPGKSFLDRMIALVEGSERRKTPNEIALNILLAAMTIIFLMA
VVTMQPVAIYSKDYMAAAPDSAVIDGNGVTGIVMVSLLVCLIPTTIGALLSAIGIAGMDRLIQRNVMAMSGRAVEAAGDV
NTLLLDKTGTITYGNRRAGAFLPVPGIGGNHLADAAQLSSLADETPEGRSIVVFAKEAYGLRERDAGELSHATWVEFTAQ
TRMSGVDLDEDGGTHHIRKGAAAAVLDWVKDNGGTPGNASELVDQISQEGGTPLLVAERKPGRQARVLGVIHLKDVVKEG
MVERFAKLRQMGIRTVMVTGDNPLTAKAIAAEAGVDDFLAEARPEDKMALIRKEQDGGRLVAMTGDGTNDAPALAQADVG
VAMNTGTSAAKEAGNMVDLDSDPTKLIEIVAIGKQLLMTRGALTTFSIANDIAKYFAIIPAIFAAVYPSLDALNVMRLSS
PESAIISAVIFNAIIIVALVPLALKGVKYKPGGASAMLRRNLFVYGPGGIVAPFIGIKLIDIIISFIPGIAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 1e-174 60
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 8e-175 60
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 2e-149 56
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-149 55
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-149 55
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-149 55
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 3e-149 55
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-149 55