Gene Information

Name : Snas_1414 (Snas_1414)
Accession : YP_003510214.1
Strain : Stackebrandtia nassauensis DSM 44728
Genome accession: NC_013947
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1500058 - 1500774 bp
Length : 717 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: scl:sce1003 ABC transporter, ATP-binding protein

DNA sequence : 
GTGACGTTGCTGACCCTGTCCGGTGTACACCGCACTCATGGTCGAGGAGAAACCGCCGTGCGTGCCCTGCGCGGCGTGGA
CATGAGCGTGGGCCCCGGAGAACTGGTCGCCGTCATGGGACCGTCAGGGTCGGGAAAGTCCACTTTGCTGAATATCGCCG
GAGGCCTCGACATGCCCACCTCCGGCGAGGTCAGCGTCGACGACACCCCACTGGCCTCGCTGCCCAAGCGGGCCCTGTCA
CGACTGCGCCGACGGTCCATCGGCTACGTCTTCCAGAACTTCAACCTGGTTCCCAGTCTCACCGCGATCGAGAACGTCGC
GCTGCCCCTGGAACTGGACGGCGTCCCGGTACGCAAGGCCCGCGCGGCCGCGGCCGGGTCGCTCGCCGACGTCGGGGTGG
GTGACCTGGCGGAACGGTTTCCCGACGACATGTCGGGCGGTCAACAGCAGCGGGTCGCGATAGCGCGCGCCGTGGTGGGC
GAGCGGCGCCTCGTCCTGGCCGACGAACCCACCGGCGCGCTGGACTCCCGTACCGGGGAGTCGGTGCTGCGGCTGCTGCG
CGCCCGCTGCGACTCCGGCGCCGGCGGGGTGCTCGTCACCCACGACGCCCGGCACGCCGCCTGGGCCGACCGGGTGGTCT
TCCTGCGCGACGGGCGGGTCGTGGACGCCGCCGGACCGCTGCCCAGCGTCGATTCGCTGCTGGAGGGCACCACGTGA

Protein sequence : 
MTLLTLSGVHRTHGRGETAVRALRGVDMSVGPGELVAVMGPSGSGKSTLLNIAGGLDMPTSGEVSVDDTPLASLPKRALS
RLRRRSIGYVFQNFNLVPSLTAIENVALPLELDGVPVRKARAAAAGSLADVGVGDLAERFPDDMSGGQQQRVAIARAVVG
ERRLVLADEPTGALDSRTGESVLRLLRARCDSGAGGVLVTHDARHAAWADRVVFLRDGRVVDAAGPLPSVDSLLEGTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-33 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snas_1414 YP_003510214.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-31 46
Snas_1414 YP_003510214.1 ABC transporter-like protein CP001581.1.gene598.p Protein 1e-38 43
Snas_1414 YP_003510214.1 ABC transporter-like protein CP001581.1.gene798.p Protein 5e-36 43
Snas_1414 YP_003510214.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-39 42