Gene Information

Name : Mrub_0624 (Mrub_0624)
Accession : YP_003506411.1
Strain : Meiothermus ruber DSM 1279
Genome accession: NC_013946
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 602444 - 603223 bp
Length : 780 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; InterPro IPR003439:IPR003593:IPR017871; KEGG: sil:SPO3365 zinc/manganese/iron ABC transporter, ATP-binding protein; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; SPTR: A4BY27 Zinc ABC tr

DNA sequence : 
GTGATCACCCAACCTAGAACCGTTCAGAACCCGGAATCCGGGGCCTCGAGCCCCCTCCGCGTGCGCGACCTGACCGTGGT
CTACCGGGAGAAGCCAGCCTTGTGGGATGTGGATCTGGAAGTACCCACCGGGCAGCTTTGCGCCATTGTGGGCCCCAACG
GGGCGGGCAAATCCACCCTGATTAAGGCAGTCCTGGGGCTGGTGCCGGTGGCCTCGGGGCAGGTGCGCTTTTTTGGCCAG
AGCCTGGCACAGGCCCGCAAACGCATCGGCTATGTGCCCCAGCGGGGCTCGGTGGACTGGGATTTCCCCACCAGCGTACT
GGACGTGGTCATGATGGGGCTTTACGGCCAGTTGGGCTGGTTCAAGCGGCCCGGCCCGCGCGAGCGCGAGGCAGCCCTGC
GCTGCCTGGAGCAGGTCTCGATGCAGGCCTTTACCACCCGCCAGATCTCGCAGCTATCCGGCGGCCAGCAGCAGCGGGTG
TTTCTGGCCCGGGCCCTGGCCCAGGATGCCGATCTCTACTTTATGGACGAGCCCTTCGCTGGGGTGGATGCCGTTACCGA
AGAGGCCATCCTGCGGGTACTGCACGAGCTTAAGAAGCAGGGTAAAACCGTGGTGGTGGTACACCACGACCTGGAAACCG
TGCGCGATTACTTCGACCACCTGACCCTGCTGAACGTGCAGGTAATAGCCAGCGGGCCGATGGAAGAGGTGTTTACACCC
GAGAACCTAAAACGAACCTACGGGGAGCGGATGCGGTGGGGGGAAAGGCACAGCGCATGA

Protein sequence : 
MITQPRTVQNPESGASSPLRVRDLTVVYREKPALWDVDLEVPTGQLCAIVGPNGAGKSTLIKAVLGLVPVASGQVRFFGQ
SLAQARKRIGYVPQRGSVDWDFPTSVLDVVMMGLYGQLGWFKRPGPREREAALRCLEQVSMQAFTTRQISQLSGGQQQRV
FLARALAQDADLYFMDEPFAGVDAVTEEAILRVLHELKKQGKTVVVVHHDLETVRDYFDHLTLLNVQVIASGPMEEVFTP
ENLKRTYGERMRWGERHSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 1e-49 47
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 2e-49 47
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-50 46
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-50 46
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-51 45
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 5e-51 45
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 7e-51 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mrub_0624 YP_003506411.1 ABC transporter BAC0400 Protein 8e-74 62
Mrub_0624 YP_003506411.1 ABC transporter BAC0350 Protein 3e-51 45
Mrub_0624 YP_003506411.1 ABC transporter BAC0440 Protein 3e-49 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mrub_0624 YP_003506411.1 ABC transporter VFG0526 Protein 3e-51 45