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Name : Mrub_0047 (Mrub_0047) Accession : YP_003505848.1 Strain : Meiothermus ruber DSM 1279 Genome accession: NC_013946 Putative virulence/resistance : Resistance Product : major facilitator superfamily protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 40126 - 41331 bp Length : 1206 bp Strand : + Note : PFAM: major facilitator superfamily MFS_1; SPTR: A6E7B4 Tetracycline resistance protein; InterPro IPR001958:IPR011701:IPR007114:IPR005829; COGs: COG2814 Arabinose efflux permease; KEGG: rce:RC1_1688 tetracycline resistance protein, class C; PFAM: Major Fa DNA sequence : ATGTCGAAGAGCGCCTCTATTCCCTTCATCCTGATTTCGGTACTTATCAACGTGATGGGCCTGGGTCTGGTCATTCCGGT CTTGCCCAAGCTCATCGAGACCCTGGCCGGCGGCGTGGAGGCCGGGGCCCGGCTCAATGGCCTGTTTTTTGCGGTGTACG CCGTAATGCAATTCGCCTTTGGCCCCATCCTGGGCATGCTCTCCGACCGCTACGGGCGCCGCCCGGTGCTGCTGGCCTCG CTGGTGGGCACCGCCGTGGATTACTTGATTGCCGCCCTCACCCAGTCCATCTGGGTGCTGTTTGCGGCGCGGGTGATTGC CGGGGCATTGGGGGCCAGCCTCTCGACCGCCAACGCCTACATTGCCGATATTTCCAAACCCGAAGAGCGGGCCCGCAACT TTGGCCTGATTGGGGCTACCTTTGGGATGGGTTTCGTGCTGGGGCCGGTGCTGGGCGGGCTACTGGGCAACATTGACCTG CGCCTGCCTTTCTACTTTGCGGCGGGACTGGCCTTCCTCAACTTTTTGTATGGCTACTTTGTGCTGCCCGAGTCGCTCAA GCCGGAAAACCGCAACACCCAGGCCCGCTCGCTCAACCCGTTTGTGGCCCTGGGGATCTTGCGCAAGACCCCCATCCTGC GGGGGTTATCCCTGAGCCTCGCGCTCATCTTTCTGGCCTTCGGGTCTTTGCAGAGTGTGTGGGTGCTGTACACCGCCTAC AAGTTTGGCTGGGAGCCGCTCGAGGTGGGCTTCTCGCTGTTTCTGGTGGGCTTGGGCGGGGTGATTGTCCAGGCCGGGCT GGTTCGGCCCGTGGTGGCCCACCTGGGGGAGCGCCGGGCCCTGACCCTGGCCCAGAGCATGGGGCTGTTCTCCTTCACCT TGTACGGCCTGGCCACCCAGGGCTGGATGATGTACGCCATCATCGCCCTGGCCGCCCTGAGCAACCTGGGCCAGCCCCTC ATTCAGTCCTTCCTGACCCGCGAGGTCTCGCCGCAGGAGCAGGGCACCCTGCAAGGGGCGCTGGCCGGGCTGCAAAGCCT GACGGTGGCGGTGGGCGGTCTTTTGGGTGGGTTCCTCTTTTCGGTGGTGGCGAGGCCCGAGGTGGCCCCCTGGCTGGTGG GGCTGCCTTTTTTTGTGGGGGCCCTGCTCTACGCCACGGCGGCGGCCAACACCGCCCGGCTGTTTCGCGGCCTGCGAGGC AGTTAG Protein sequence : MSKSASIPFILISVLINVMGLGLVIPVLPKLIETLAGGVEAGARLNGLFFAVYAVMQFAFGPILGMLSDRYGRRPVLLAS LVGTAVDYLIAALTQSIWVLFAARVIAGALGASLSTANAYIADISKPEERARNFGLIGATFGMGFVLGPVLGGLLGNIDL RLPFYFAAGLAFLNFLYGYFVLPESLKPENRNTQARSLNPFVALGILRKTPILRGLSLSLALIFLAFGSLQSVWVLYTAY KFGWEPLEVGFSLFLVGLGGVIVQAGLVRPVVAHLGERRALTLAQSMGLFSFTLYGLATQGWMMYAIIALAALSNLGQPL IQSFLTREVSPQEQGTLQGALAGLQSLTVAVGGLLGGFLFSVVARPEVAPWLVGLPFFVGALLYATAAANTARLFRGLRG S |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tetA | CAJ77066.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 4e-45 | 44 |
| tetA(A) | ACN81011.1 | TetA(A) | Not tested | AbaR5 | Protein | 5e-45 | 44 |
| tetA | YP_006098396.1 | tetracycline resistance protein | Not tested | Tn2411 | Protein | 4e-45 | 43 |
| tetA(A) | ACK44537.1 | TetA(A) | Not tested | SGI1 | Protein | 3e-45 | 43 |
| tetA(A) | AGK07027.1 | TetA(A) | Not tested | SGI1 | Protein | 3e-45 | 43 |
| tetA(A) | AGK07085.1 | TetA(A) | Not tested | SGI1 | Protein | 3e-45 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Mrub_0047 | YP_003505848.1 | major facilitator superfamily protein | NC_011586.7045189.p0 | Protein | 6e-42 | 44 |
| Mrub_0047 | YP_003505848.1 | major facilitator superfamily protein | NC_010410.6002597.p0 | Protein | 2e-45 | 44 |
| Mrub_0047 | YP_003505848.1 | major facilitator superfamily protein | CP001485.1.gene2821. | Protein | 2e-45 | 44 |
| Mrub_0047 | YP_003505848.1 | major facilitator superfamily protein | AF534183.gene.p01 | Protein | 2e-45 | 44 |
| Mrub_0047 | YP_003505848.1 | major facilitator superfamily protein | Y19114.gene.p01 | Protein | 1e-41 | 42 |
| Mrub_0047 | YP_003505848.1 | major facilitator superfamily protein | X75761.gene.p01 | Protein | 6e-45 | 42 |
| Mrub_0047 | YP_003505848.1 | major facilitator superfamily protein | AY264780.2.gene3.p01 | Protein | 1e-45 | 42 |
| Mrub_0047 | YP_003505848.1 | major facilitator superfamily protein | AF090987.gene.p01 | Protein | 4e-39 | 42 |
