Gene Information

Name : Mrub_2418 (Mrub_2418)
Accession : YP_003508189.1
Strain : Meiothermus ruber DSM 1279
Genome accession: NC_013946
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 2471046 - 2472053 bp
Length : 1008 bp
Strand : -
Note : PFAM: transport system permease protein; SPTR: O34832 Fe(3+)-citrate import system permease protein yfmE; InterPro IPR000522; COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; KEGG: pol:Bpro_4778 transport system permease protei

DNA sequence : 
ATGAAGGCCGCATGGGCTGGCCTGAAACTTGCAATCATTCCCCTGCTCACCCTGGGGCTGGTGGTGGTCGGTATCGCCGC
GCTGGGGGTTGGTGCGGTGCGCATGAGCTTTGCCGAGGTGCTGCAAGCGCTTGGCCACCTGGGCCATGCCGAGGATACCC
ATGCCCGCATTCTCTACGATTTACGCATGCCGCGCATCCTGGTGGGGGCTCTTTGCGGGGCTATGTTCGCCGCCTCCGGG
GCCATCTTGCAGGGTGTGGTGCGGAACCCGCTGGCCTCGCCGGACATTGTGGGCGTAGCGGCTGGGGCAGGTCTGGCCGC
AGTCTTTACCCTGATTCTGCTGCCACAGGCCCCGCTCTGGGCCCTGCCGGTGGGGGCCTGCCTGGGCGGGTTTTTGGCTT
TTGTGCTGGTCTACCTGCTCTCTATCCGCACCGGGGAGGTGCTGCCTATACGCCTGGCCCTGATTGGCGTGGCGGTAGAA
GCATCGCTGGACGCTTTGCGCCGGTTGATTCTGGTGCGGGCCGACGATGGGGTGGCCCAAGCCCTAACTTTCCTGGTGGG
CACGGTGTATGGGGCGGACTGGGAACGCCTTTGGAGGGTGCTGCCTTTTGCGCTTCTCCTTATCCCGCTGGCGCTGGTGC
TTCACCAGAAGCTGGATGTGCTCAGTTTTGGTGATGCCACCGCCAAGAGCCTGGGTATGCGTTTGGAGCTGGGCCGGCTG
GTGGCCCTTTTGCTGGGAGTAGCCCTGGCCTCCGTGGCGGTGACAGGAACAGGCATTCTGGGGTTTGTGGGACTGATTGC
ACCCCATGCGGCCCGGCTGCTGGTGGGCTCGAGGTTCCATTTGCTGCTGCCGGTCTCTTTGCTGCTGGGGGCCATCCTGG
TGGTTGTAGCAGATACGCTGGCTCGAGGGCTGGTGCCGCCTTTAGAGATACCTGCCGGACTGCTGACCACCCTGGTGGGC
GCACCTTACTTCTTATACCTGATGCGAAGGGTGGGACGAGCACGATGA

Protein sequence : 
MKAAWAGLKLAIIPLLTLGLVVVGIAALGVGAVRMSFAEVLQALGHLGHAEDTHARILYDLRMPRILVGALCGAMFAASG
AILQGVVRNPLASPDIVGVAAGAGLAAVFTLILLPQAPLWALPVGACLGGFLAFVLVYLLSIRTGEVLPIRLALIGVAVE
ASLDALRRLILVRADDGVAQALTFLVGTVYGADWERLWRVLPFALLLIPLALVLHQKLDVLSFGDATAKSLGMRLELGRL
VALLLGVALASVAVTGTGILGFVGLIAPHAARLLVGSRFHLLLPVSLLLGAILVVVADTLARGLVPPLEIPAGLLTTLVG
APYFLYLMRRVGRAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0584 NP_938960.1 iron transport system membrane protein Virulence Not named Protein 2e-20 44
fecD AAL08452.1 FecD Virulence SRL Protein 5e-21 43
ciuC YP_005683345.1 Iron ABC transporter permease Virulence PiCp 4 Protein 6e-21 41
ciuC YP_003783390.1 iron ABC transporter permease Virulence PiCp 4 Protein 6e-21 41
ciuC YP_005685431.1 Iron ABC transporter permease Virulence PiCp 4 Protein 6e-21 41
ciuC YP_005681254.1 Iron ABC transporter permease Virulence PiCp 4 Protein 6e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mrub_2418 YP_003508189.1 transport system permease BAC0163 Protein 2e-21 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mrub_2418 YP_003508189.1 transport system permease VFG1043 Protein 3e-21 43