Gene Information

Name : Mrub_2417 (Mrub_2417)
Accession : YP_003508188.1
Strain : Meiothermus ruber DSM 1279
Genome accession: NC_013946
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2470225 - 2471049 bp
Length : 825 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; InterPro IPR003439:IPR003593:IPR017871; KEGG: bsu:BSU33290 ferrichrome ABC transporter ATP-binding protein; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; SPTR: P49

DNA sequence : 
ATGAATCTATCCACCAATCAGCTATACCTGGGCTACGACGGACGCCTGGTCGTCGAGGATCTTAATCTTTCCATTGCACA
GGGGCAGATCTCGGTCTTGATTGGGCCCAACGGCTGCGGGAAGTCCACCATTTTGCGTTCCCTGGCCCGGCTCTTACCGC
CCAGACAGGGTTCTGTGCTGCTGGATGGAAAGATGATCCAGCACCTTCCGACCAAGGTGGTGGCAAAAAAACTGGCGATA
CTGCCCCAGATGCCACAGGCCCCCGAGGGCCTGAGCGTGGAGCAGCTGGTATGGTTCGGACGCTACCCCTACCAGTCTAC
CCTGGGCGGACGCACTAAGTCCGATCGAGAAGCGGTGGAGTGGGCCCTGGCCCAGACCGGCATGACGGTTTTTGCCAGCC
GCGCCCTGGAGACCCTATCGGGGGGGCAGCGCCAGCGGGCCTGGATAGCAATGGCCCTGGCCCAGCAGACCCCTATTTTG
CTGCTCGATGAGCCCACCACCTACCTAGACCTCAGCCACCAATTGGAGGTGCTGCAATTGTTGGTGCGGCTCAATCGGGA
GGAAGGTAAGACGGTGGTTATGGTGCTGCACGACCTTAATCAGGCCTCCCGCTTTGCTCATCAATTGATTGTGGTGAATG
GGGGCCGGGTGGTGGCCCAGGGCGTGCCGGAGGAGGTGCTGAACGAGCAAATACTCCGGGAGGTATTTGGCCTTAAGGCG
CATTTCTTGCGGGATCCCGAAACCGGCCGGCCTTACTGCATTCCCTATGCCCTTGCACGTAAAGAGCCTCTAATAGTGGA
CGAACGAGTGGAGGAGAAAGCATGA

Protein sequence : 
MNLSTNQLYLGYDGRLVVEDLNLSIAQGQISVLIGPNGCGKSTILRSLARLLPPRQGSVLLDGKMIQHLPTKVVAKKLAI
LPQMPQAPEGLSVEQLVWFGRYPYQSTLGGRTKSDREAVEWALAQTGMTVFASRALETLSGGQRQRAWIAMALAQQTPIL
LLDEPTTYLDLSHQLEVLQLLVRLNREEGKTVVMVLHDLNQASRFAHQLIVVNGGRVVAQGVPEEVLNEQILREVFGLKA
HFLRDPETGRPYCIPYALARKEPLIVDERVEEKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-55 49
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-57 49
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-56 47
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-56 47
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-49 46
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-49 46
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-49 46
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-49 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-54 45
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-54 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-54 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-54 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-54 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mrub_2417 YP_003508188.1 ABC transporter BAC0164 Protein 1e-55 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mrub_2417 YP_003508188.1 ABC transporter VFG1042 Protein 1e-55 49
Mrub_2417 YP_003508188.1 ABC transporter VFG0925 Protein 2e-58 49